Cluster: CGMR040385_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR040385
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_68889 | k141_68889_235 | 250807 | 251865 | - | 9.B.18.2.1 |
| CAZyme | k141_68889 | k141_68889_236 | 251858 | 253060 | - | GT4 |
| pfam | k141_68889 | k141_68889_237 | 253065 | 254039 | - | ATP-grasp_3 | ATPgrasp_Ter | PylC-like_N |
| TC | k141_68889 | k141_68889_238 | 254032 | 254697 | - | 9.B.18.1.2 |
| STP | k141_68889 | k141_68889_239 | 254690 | 255943 | - | Aminotran_1_2 |
| TC | k141_68889 | k141_68889_240 | 255959 | 257839 | - | 9.B.18.2.1 |
Gene ID: k141_68889_235
Type: TC
Location: 250807 - 251865 (-)
Type: TC
Location: 250807 - 251865 (-)
Gene ID: k141_68889_236
Type: CAZyme
Location: 251858 - 253060 (-)
Type: CAZyme
Location: 251858 - 253060 (-)
Gene ID: k141_68889_237
Type: pfam
Location: 253065 - 254039 (-)
Type: pfam
Location: 253065 - 254039 (-)
Gene ID: k141_68889_238
Type: TC
Location: 254032 - 254697 (-)
Type: TC
Location: 254032 - 254697 (-)
Gene ID: k141_68889_239
Type: STP
Location: 254690 - 255943 (-)
Type: STP
Location: 254690 - 255943 (-)
Gene ID: k141_68889_240
Type: TC
Location: 255959 - 257839 (-)
Type: TC
Location: 255959 - 257839 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.