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Cluster: CGMR040385_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_153508 k141_153508_1 207 545 - 4.A.3.1.2
TF k141_153508 k141_153508_2 760 1764 - LacI
TC k141_153508 k141_153508_3 2122 3888 + 4.A.3.1.1
CAZyme k141_153508 k141_153508_4 3955 5394 + GH1
TF k141_153508 k141_153508_5 5745 6755 - LacI
TC k141_153508 k141_153508_6 7031 8809 + 4.A.3.1.1
CAZyme k141_153508 k141_153508_7 8885 10306 + GH1
TF k141_153508 k141_153508_8 10819 11583 - HTH_DeoR
sulfatase k141_153508 k141_153508_9 11790 12842 + S1_4
TC k141_153508 k141_153508_10 13169 13651 - 4.A.6.1.5
Gene ID: k141_153508_1
Type: TC
Location: 207 - 545 (-)
Gene ID: k141_153508_2
Type: TF
Location: 760 - 1764 (-)
Gene ID: k141_153508_3
Type: TC
Location: 2122 - 3888 (+)
Gene ID: k141_153508_4
Type: CAZyme
Location: 3955 - 5394 (+)
Gene ID: k141_153508_5
Type: TF
Location: 5745 - 6755 (-)
Gene ID: k141_153508_6
Type: TC
Location: 7031 - 8809 (+)
Gene ID: k141_153508_7
Type: CAZyme
Location: 8885 - 10306 (+)
Gene ID: k141_153508_8
Type: TF
Location: 10819 - 11583 (-)
Gene ID: k141_153508_9
Type: sulfatase
Location: 11790 - 12842 (+)
Gene ID: k141_153508_10
Type: TC
Location: 13169 - 13651 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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