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Cluster: CGMR040299_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_123358 k141_123358_9 6536 8329 + 3.A.18.1.1
TF k141_123358 k141_123358_10 8387 9247 - HTH_AraC
NULL(UNKNOWN) k141_123358 k141_123358_11 9355 9867 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_123358 k141_123358_12 9873 10622 - GT2
CAZyme k141_123358 k141_123358_13 10634 11899 - GT4
pfam k141_123358 k141_123358_14 12033 13235 + UDPG_MGDP_dh | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
pfam k141_123358 k141_123358_15 13250 14377 + Epimerase_2
CAZyme k141_123358 k141_123358_16 14358 15563 - GT4
CAZyme k141_123358 k141_123358_17 15560 16441 - GT2
Gene ID: k141_123358_9
Type: TC
Location: 6536 - 8329 (+)
Gene ID: k141_123358_10
Type: TF
Location: 8387 - 9247 (-)
Gene ID: k141_123358_11
Type:
Location: 9355 - 9867 (+)
Gene ID: k141_123358_12
Type: CAZyme
Location: 9873 - 10622 (-)
Gene ID: k141_123358_13
Type: CAZyme
Location: 10634 - 11899 (-)
Gene ID: k141_123358_14
Type: pfam
Location: 12033 - 13235 (+)
Gene ID: k141_123358_15
Type: pfam
Location: 13250 - 14377 (+)
Gene ID: k141_123358_16
Type: CAZyme
Location: 14358 - 15563 (-)
Gene ID: k141_123358_17
Type: CAZyme
Location: 15560 - 16441 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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