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Cluster: CGMR040299_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_69291 k141_69291_67 73360 74799 - 3.A.1.30.1
pfam k141_69291 k141_69291_68 75227 76438 + Omp85
pfam k141_69291 k141_69291_69 76497 78122 + Sulfatase | EptA_B_N
CAZyme k141_69291 k141_69291_70 78226 78981 + GT2
peptidase k141_69291 k141_69291_71 79010 80356 + M38.UNW
NULL(UNKNOWN) k141_69291 k141_69291_72 80552 80755 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_69291 k141_69291_73 80898 82559 - 4.C.1.1.4
pfam k141_69291 k141_69291_74 82711 84033 + UPF0004 | Radical_SAM
pfam k141_69291 k141_69291_75 84044 84955 + Lip_A_acyltrans
CAZyme k141_69291 k141_69291_76 84961 85953 + GT2
Gene ID: k141_69291_67
Type: TC
Location: 73360 - 74799 (-)
Gene ID: k141_69291_68
Type: pfam
Location: 75227 - 76438 (+)
Gene ID: k141_69291_69
Type: pfam
Location: 76497 - 78122 (+)
Gene ID: k141_69291_70
Type: CAZyme
Location: 78226 - 78981 (+)
Gene ID: k141_69291_71
Type: peptidase
Location: 79010 - 80356 (+)
Gene ID: k141_69291_72
Type:
Location: 80552 - 80755 (-)
Gene ID: k141_69291_73
Type: TC
Location: 80898 - 82559 (-)
Gene ID: k141_69291_74
Type: pfam
Location: 82711 - 84033 (+)
Gene ID: k141_69291_75
Type: pfam
Location: 84044 - 84955 (+)
Gene ID: k141_69291_76
Type: CAZyme
Location: 84961 - 85953 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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