Cluster: CGMR040299_CGC28
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 7
- Substrate:
- Genome ID: CGMR040299
- CGC Family ID: CGCFAM_06642
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_49557 | k141_49557_4 | 5714 | 8851 | + | 2.A.21.9.2 |
| pfam | k141_49557 | k141_49557_5 | 8877 | 9818 | + | 3Beta_HSD | Epimerase | NAD_binding_4 | GDP_Man_Dehyd |
| STP | k141_49557 | k141_49557_6 | 9827 | 10951 | + | HATPase_c | Response_reg |
| TC | k141_49557 | k141_49557_7 | 11068 | 14280 | - | 2.A.21.9.1 |
| pfam | k141_49557 | k141_49557_8 | 14461 | 15465 | - | Exo_endo_phos |
| CAZyme | k141_49557 | k141_49557_9 | 15540 | 16718 | - | GT2 |
| pfam | k141_49557 | k141_49557_10 | 16780 | 17865 | - | Acyl_transf_3 |
| CAZyme | k141_49557 | k141_49557_11 | 17898 | 18800 | - | GT2 |
| CAZyme | k141_49557 | k141_49557_12 | 18793 | 19962 | - | GT2 |
| CAZyme | k141_49557 | k141_49557_13 | 20062 | 21177 | - | GT4 |
| CAZyme | k141_49557 | k141_49557_14 | 21179 | 22114 | - | GT2 |
| pfam | k141_49557 | k141_49557_15 | 22124 | 23587 | - | Polysacc_synt | Polysacc_synt_3 |
| pfam | k141_49557 | k141_49557_16 | 23670 | 24290 | - | Hexapep | Hexapep_2 |
| CAZyme | k141_49557 | k141_49557_17 | 24319 | 25392 | - | GT4 |
| CAZyme | k141_49557 | k141_49557_18 | 25454 | 26653 | - | GT2 |
Gene ID: k141_49557_4
Type: TC
Location: 5714 - 8851 (+)
Type: TC
Location: 5714 - 8851 (+)
Gene ID: k141_49557_5
Type: pfam
Location: 8877 - 9818 (+)
Type: pfam
Location: 8877 - 9818 (+)
Gene ID: k141_49557_6
Type: STP
Location: 9827 - 10951 (+)
Type: STP
Location: 9827 - 10951 (+)
Gene ID: k141_49557_7
Type: TC
Location: 11068 - 14280 (-)
Type: TC
Location: 11068 - 14280 (-)
Gene ID: k141_49557_8
Type: pfam
Location: 14461 - 15465 (-)
Type: pfam
Location: 14461 - 15465 (-)
Gene ID: k141_49557_9
Type: CAZyme
Location: 15540 - 16718 (-)
Type: CAZyme
Location: 15540 - 16718 (-)
Gene ID: k141_49557_10
Type: pfam
Location: 16780 - 17865 (-)
Type: pfam
Location: 16780 - 17865 (-)
Gene ID: k141_49557_11
Type: CAZyme
Location: 17898 - 18800 (-)
Type: CAZyme
Location: 17898 - 18800 (-)
Gene ID: k141_49557_12
Type: CAZyme
Location: 18793 - 19962 (-)
Type: CAZyme
Location: 18793 - 19962 (-)
Gene ID: k141_49557_13
Type: CAZyme
Location: 20062 - 21177 (-)
Type: CAZyme
Location: 20062 - 21177 (-)
Gene ID: k141_49557_14
Type: CAZyme
Location: 21179 - 22114 (-)
Type: CAZyme
Location: 21179 - 22114 (-)
Gene ID: k141_49557_15
Type: pfam
Location: 22124 - 23587 (-)
Type: pfam
Location: 22124 - 23587 (-)
Gene ID: k141_49557_16
Type: pfam
Location: 23670 - 24290 (-)
Type: pfam
Location: 23670 - 24290 (-)
Gene ID: k141_49557_17
Type: CAZyme
Location: 24319 - 25392 (-)
Type: CAZyme
Location: 24319 - 25392 (-)
Gene ID: k141_49557_18
Type: CAZyme
Location: 25454 - 26653 (-)
Type: CAZyme
Location: 25454 - 26653 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
Barnesiella_B
Species
Barnesiella_B propionica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.