Cluster: CGMR040299_CGC20
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR040299
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_6825 | k141_6825_5 | 3596 | 4801 | - | GT2 |
| pfam | k141_6825 | k141_6825_6 | 5241 | 6041 | + | Poly_export | SLBB | SLBB_2 |
| TC | k141_6825 | k141_6825_7 | 6064 | 8412 | + | 8.A.3.3.4 |
| NULL(UNKNOWN) | k141_6825 | k141_6825_8 | 8419 | 9795 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_6825 | k141_6825_9 | 9792 | 11150 | + | MatE |
| CAZyme | k141_6825 | k141_6825_10 | 11169 | 11960 | + | GT2 |
| NULL(UNKNOWN) | k141_6825 | k141_6825_11 | 11997 | 12215 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_6825 | k141_6825_12 | 12351 | 13364 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_6825 | k141_6825_13 | 13386 | 14585 | + | GT4 |
| pfam | k141_6825 | k141_6825_14 | 14861 | 15922 | + | Radical_SAM | SPASM |
| CAZyme | k141_6825 | k141_6825_15 | 15924 | 17021 | + | GT4 |
| pfam | k141_6825 | k141_6825_16 | 17156 | 17788 | + | DUF4136 |
| pfam | k141_6825 | k141_6825_17 | 17843 | 18469 | + | OMP_b-brl |
| TC | k141_6825 | k141_6825_18 | 18634 | 20229 | + | 1.B.73.2.2 |
| pfam | k141_6825 | k141_6825_19 | 20226 | 20654 | + | Lipocalin_8 |
| NULL(UNKNOWN) | k141_6825 | k141_6825_20 | 20651 | 21220 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_6825 | k141_6825_21 | 21232 | 22644 | - | 9.B.168.1.2 |
| peptidase | k141_6825 | k141_6825_22 | 22892 | 24499 | + | C26.964 |
| TC | k141_6825 | k141_6825_23 | 24537 | 26438 | + | 2.A.9.3.1 |
Gene ID: k141_6825_5
Type: CAZyme
Location: 3596 - 4801 (-)
Type: CAZyme
Location: 3596 - 4801 (-)
Gene ID: k141_6825_6
Type: pfam
Location: 5241 - 6041 (+)
Type: pfam
Location: 5241 - 6041 (+)
Gene ID: k141_6825_7
Type: TC
Location: 6064 - 8412 (+)
Type: TC
Location: 6064 - 8412 (+)
Gene ID: k141_6825_8
Type:
Location: 8419 - 9795 (+)
Type:
Location: 8419 - 9795 (+)
Gene ID: k141_6825_9
Type: pfam
Location: 9792 - 11150 (+)
Type: pfam
Location: 9792 - 11150 (+)
Gene ID: k141_6825_10
Type: CAZyme
Location: 11169 - 11960 (+)
Type: CAZyme
Location: 11169 - 11960 (+)
Gene ID: k141_6825_11
Type:
Location: 11997 - 12215 (+)
Type:
Location: 11997 - 12215 (+)
Gene ID: k141_6825_12
Type:
Location: 12351 - 13364 (+)
Type:
Location: 12351 - 13364 (+)
Gene ID: k141_6825_13
Type: CAZyme
Location: 13386 - 14585 (+)
Type: CAZyme
Location: 13386 - 14585 (+)
Gene ID: k141_6825_14
Type: pfam
Location: 14861 - 15922 (+)
Type: pfam
Location: 14861 - 15922 (+)
Gene ID: k141_6825_15
Type: CAZyme
Location: 15924 - 17021 (+)
Type: CAZyme
Location: 15924 - 17021 (+)
Gene ID: k141_6825_16
Type: pfam
Location: 17156 - 17788 (+)
Type: pfam
Location: 17156 - 17788 (+)
Gene ID: k141_6825_17
Type: pfam
Location: 17843 - 18469 (+)
Type: pfam
Location: 17843 - 18469 (+)
Gene ID: k141_6825_18
Type: TC
Location: 18634 - 20229 (+)
Type: TC
Location: 18634 - 20229 (+)
Gene ID: k141_6825_19
Type: pfam
Location: 20226 - 20654 (+)
Type: pfam
Location: 20226 - 20654 (+)
Gene ID: k141_6825_20
Type:
Location: 20651 - 21220 (-)
Type:
Location: 20651 - 21220 (-)
Gene ID: k141_6825_21
Type: TC
Location: 21232 - 22644 (-)
Type: TC
Location: 21232 - 22644 (-)
Gene ID: k141_6825_22
Type: peptidase
Location: 22892 - 24499 (+)
Type: peptidase
Location: 22892 - 24499 (+)
Gene ID: k141_6825_23
Type: TC
Location: 24537 - 26438 (+)
Type: TC
Location: 24537 - 26438 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
Barnesiella_B
Species
Barnesiella_B propionica
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.