dbCAN Logo

Cluster: CGMR040279_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_387685 k141_387685_52 49148 50095 + 3.A.1.34.1
TC k141_387685 k141_387685_53 50092 50865 + 3.A.1.34.1
CAZyme k141_387685 k141_387685_54 51049 53340 + GH31_3
CAZyme k141_387685 k141_387685_55 53407 55659 + GH31_3
TC k141_387685 k141_387685_56 55804 56748 - 3.A.1.1.11
TC k141_387685 k141_387685_57 56745 57668 - 3.A.1.1.34
pfam k141_387685 k141_387685_58 57672 59960 - DUF5696
pfam k141_387685 k141_387685_59 59944 62016 - NHL | Yip1 | SGL
TC k141_387685 k141_387685_60 62032 62931 - 3.A.1.1.29
TC k141_387685 k141_387685_61 62945 63844 - 3.A.1.1.34
STP k141_387685 k141_387685_62 63844 66786 - SBP_bac_1
CAZyme k141_387685 k141_387685_63 67121 70537 - GH31
Gene ID: k141_387685_52
Type: TC
Location: 49148 - 50095 (+)
Gene ID: k141_387685_53
Type: TC
Location: 50092 - 50865 (+)
Gene ID: k141_387685_54
Type: CAZyme
Location: 51049 - 53340 (+)
Gene ID: k141_387685_55
Type: CAZyme
Location: 53407 - 55659 (+)
Gene ID: k141_387685_56
Type: TC
Location: 55804 - 56748 (-)
Gene ID: k141_387685_57
Type: TC
Location: 56745 - 57668 (-)
Gene ID: k141_387685_58
Type: pfam
Location: 57672 - 59960 (-)
Gene ID: k141_387685_59
Type: pfam
Location: 59944 - 62016 (-)
Gene ID: k141_387685_60
Type: TC
Location: 62032 - 62931 (-)
Gene ID: k141_387685_61
Type: TC
Location: 62945 - 63844 (-)
Gene ID: k141_387685_62
Type: STP
Location: 63844 - 66786 (-)
Gene ID: k141_387685_63
Type: CAZyme
Location: 67121 - 70537 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List