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Cluster: CGMR040279_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_36520 k141_36520_6 5935 6609 - 3.A.1.122.2
TF k141_36520 k141_36520_7 6655 7128 - HTH_AraC | HTH_AraC
NULL(UNKNOWN) k141_36520 k141_36520_8 7144 7746 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_36520 k141_36520_9 8003 9034 + GT2
CAZyme k141_36520 k141_36520_10 9040 10119 + GT4
CAZyme k141_36520 k141_36520_11 10140 11225 + GT113
pfam k141_36520 k141_36520_12 11240 12685 + Wzy_C
TC k141_36520 k141_36520_13 12682 14145 + 2.A.66.2.16
CAZyme k141_36520 k141_36520_14 14200 15501 - GH180
CAZyme k141_36520 k141_36520_15 15514 16473 - CE2
pfam k141_36520 k141_36520_16 16522 17928 - FAD_binding_2 | Amino_oxidase | NAD_binding_8
CAZyme k141_36520 k141_36520_17 17930 19378 - GH77
TC k141_36520 k141_36520_18 19389 20237 - 3.A.1.1.45
TC k141_36520 k141_36520_19 20234 21115 - 3.A.1.1.45
TC k141_36520 k141_36520_20 21134 22435 - 3.A.1.1.45
Gene ID: k141_36520_6
Type: TC
Location: 5935 - 6609 (-)
Gene ID: k141_36520_7
Type: TF
Location: 6655 - 7128 (-)
Gene ID: k141_36520_8
Type:
Location: 7144 - 7746 (+)
Gene ID: k141_36520_9
Type: CAZyme
Location: 8003 - 9034 (+)
Gene ID: k141_36520_10
Type: CAZyme
Location: 9040 - 10119 (+)
Gene ID: k141_36520_11
Type: CAZyme
Location: 10140 - 11225 (+)
Gene ID: k141_36520_12
Type: pfam
Location: 11240 - 12685 (+)
Gene ID: k141_36520_13
Type: TC
Location: 12682 - 14145 (+)
Gene ID: k141_36520_14
Type: CAZyme
Location: 14200 - 15501 (-)
Gene ID: k141_36520_15
Type: CAZyme
Location: 15514 - 16473 (-)
Gene ID: k141_36520_16
Type: pfam
Location: 16522 - 17928 (-)
Gene ID: k141_36520_17
Type: CAZyme
Location: 17930 - 19378 (-)
Gene ID: k141_36520_18
Type: TC
Location: 19389 - 20237 (-)
Gene ID: k141_36520_19
Type: TC
Location: 20234 - 21115 (-)
Gene ID: k141_36520_20
Type: TC
Location: 21134 - 22435 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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