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Cluster: CGMR040279_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_220187 k141_220187_143 152946 154169 + GT4
CAZyme k141_220187 k141_220187_144 154166 155221 + GT2
CAZyme k141_220187 k141_220187_145 155225 156220 + GT2
CAZyme k141_220187 k141_220187_146 156236 157321 + GT2
STP k141_220187 k141_220187_147 157314 158684 + EAL
TC k141_220187 k141_220187_148 158733 160082 + 9.B.34.1.2
TF k141_220187 k141_220187_149 160119 160928 - HTH_AraC | HTH_AraC
pfam k141_220187 k141_220187_150 161050 161904 + AP_endonuc_2
CAZyme k141_220187 k141_220187_151 161908 162978 + GH179
pfam k141_220187 k141_220187_152 162983 163819 + AP_endonuc_2
TC k141_220187 k141_220187_153 163862 164536 - 1.C.113.1.3
Gene ID: k141_220187_143
Type: CAZyme
Location: 152946 - 154169 (+)
Gene ID: k141_220187_144
Type: CAZyme
Location: 154166 - 155221 (+)
Gene ID: k141_220187_145
Type: CAZyme
Location: 155225 - 156220 (+)
Gene ID: k141_220187_146
Type: CAZyme
Location: 156236 - 157321 (+)
Gene ID: k141_220187_147
Type: STP
Location: 157314 - 158684 (+)
Gene ID: k141_220187_148
Type: TC
Location: 158733 - 160082 (+)
Gene ID: k141_220187_149
Type: TF
Location: 160119 - 160928 (-)
Gene ID: k141_220187_150
Type: pfam
Location: 161050 - 161904 (+)
Gene ID: k141_220187_151
Type: CAZyme
Location: 161908 - 162978 (+)
Gene ID: k141_220187_152
Type: pfam
Location: 162983 - 163819 (+)
Gene ID: k141_220187_153
Type: TC
Location: 163862 - 164536 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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