Cluster: CGMR040279_CGC1
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR040279
- CGC Family ID: CGCFAM_06514
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_378290 | k141_378290_3 | 1402 | 6102 | - | GH13_21 |
| NULL(UNKNOWN) | k141_378290 | k141_378290_4 | 6099 | 8735 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | k141_378290 | k141_378290_5 | 8766 | 10199 | - | SBP_bac_1 |
| TC | k141_378290 | k141_378290_6 | 10309 | 11211 | - | 3.A.1.1.32 |
| TC | k141_378290 | k141_378290_7 | 11192 | 12130 | - | 3.A.1.1.20 |
| pfam | k141_378290 | k141_378290_8 | 12127 | 14706 | - | DUF5696 |
| pfam | k141_378290 | k141_378290_9 | 14719 | 16806 | - | Yip1 |
| TC | k141_378290 | k141_378290_10 | 16813 | 17619 | - | 3.A.1.1.39 |
| TC | k141_378290 | k141_378290_11 | 17661 | 18563 | - | 3.A.1.1.23 |
| STP | k141_378290 | k141_378290_12 | 18570 | 21422 | - | SBP_bac_1 |
| CAZyme | k141_378290 | k141_378290_13 | 21534 | 23681 | - | GH78 |
| CAZyme | k141_378290 | k141_378290_14 | 23693 | 25123 | - | GH20 |
| CAZyme | k141_378290 | k141_378290_15 | 25126 | 29103 | - | GH13_21 |
| CAZyme | k141_378290 | k141_378290_16 | 29315 | 30703 | + | GH28 |
Gene ID: k141_378290_3
Type: CAZyme
Location: 1402 - 6102 (-)
Type: CAZyme
Location: 1402 - 6102 (-)
Gene ID: k141_378290_4
Type:
Location: 6099 - 8735 (-)
Type:
Location: 6099 - 8735 (-)
Gene ID: k141_378290_5
Type: STP
Location: 8766 - 10199 (-)
Type: STP
Location: 8766 - 10199 (-)
Gene ID: k141_378290_6
Type: TC
Location: 10309 - 11211 (-)
Type: TC
Location: 10309 - 11211 (-)
Gene ID: k141_378290_7
Type: TC
Location: 11192 - 12130 (-)
Type: TC
Location: 11192 - 12130 (-)
Gene ID: k141_378290_8
Type: pfam
Location: 12127 - 14706 (-)
Type: pfam
Location: 12127 - 14706 (-)
Gene ID: k141_378290_9
Type: pfam
Location: 14719 - 16806 (-)
Type: pfam
Location: 14719 - 16806 (-)
Gene ID: k141_378290_10
Type: TC
Location: 16813 - 17619 (-)
Type: TC
Location: 16813 - 17619 (-)
Gene ID: k141_378290_11
Type: TC
Location: 17661 - 18563 (-)
Type: TC
Location: 17661 - 18563 (-)
Gene ID: k141_378290_12
Type: STP
Location: 18570 - 21422 (-)
Type: STP
Location: 18570 - 21422 (-)
Gene ID: k141_378290_13
Type: CAZyme
Location: 21534 - 23681 (-)
Type: CAZyme
Location: 21534 - 23681 (-)
Gene ID: k141_378290_14
Type: CAZyme
Location: 23693 - 25123 (-)
Type: CAZyme
Location: 23693 - 25123 (-)
Gene ID: k141_378290_15
Type: CAZyme
Location: 25126 - 29103 (-)
Type: CAZyme
Location: 25126 - 29103 (-)
Gene ID: k141_378290_16
Type: CAZyme
Location: 29315 - 30703 (+)
Type: CAZyme
Location: 29315 - 30703 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA5905
Species
UBA5905 sp004558485
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.