Cluster: CGMR040139_CGC7
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR040139
- CGC Family ID: CGCFAM_00036
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_28893 | k141_28893_20 | 22001 | 23413 | + | GH25 |
| peptidase | k141_28893 | k141_28893_21 | 23592 | 24374 | + | M24.UPA |
| TC | k141_28893 | k141_28893_22 | 24374 | 25027 | + | 9.B.18.1.2 |
| NULL(UNKNOWN) | k141_28893 | k141_28893_23 | 25142 | 25777 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_28893 | k141_28893_24 | 25794 | 27167 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_28893 | k141_28893_25 | 27182 | 27955 | + | GT111 |
| pfam | k141_28893 | k141_28893_26 | 28030 | 29208 | + | Amino_oxidase | GLF | NAD_binding_8 |
| pfam | k141_28893 | k141_28893_27 | 29373 | 30437 | + | Acyl_transf_3 |
| TC | k141_28893 | k141_28893_28 | 30489 | 31943 | + | 2.A.66.2.16 |
| CAZyme | k141_28893 | k141_28893_29 | 32026 | 32955 | + | GT2 |
| CAZyme | k141_28893 | k141_28893_30 | 33044 | 33943 | + | GT2 |
| CAZyme | k141_28893 | k141_28893_31 | 33948 | 34853 | + | GT2 |
Gene ID: k141_28893_20
Type: CAZyme
Location: 22001 - 23413 (+)
Type: CAZyme
Location: 22001 - 23413 (+)
Gene ID: k141_28893_21
Type: peptidase
Location: 23592 - 24374 (+)
Type: peptidase
Location: 23592 - 24374 (+)
Gene ID: k141_28893_22
Type: TC
Location: 24374 - 25027 (+)
Type: TC
Location: 24374 - 25027 (+)
Gene ID: k141_28893_23
Type:
Location: 25142 - 25777 (+)
Type:
Location: 25142 - 25777 (+)
Gene ID: k141_28893_24
Type:
Location: 25794 - 27167 (+)
Type:
Location: 25794 - 27167 (+)
Gene ID: k141_28893_25
Type: CAZyme
Location: 27182 - 27955 (+)
Type: CAZyme
Location: 27182 - 27955 (+)
Gene ID: k141_28893_26
Type: pfam
Location: 28030 - 29208 (+)
Type: pfam
Location: 28030 - 29208 (+)
Gene ID: k141_28893_27
Type: pfam
Location: 29373 - 30437 (+)
Type: pfam
Location: 29373 - 30437 (+)
Gene ID: k141_28893_28
Type: TC
Location: 30489 - 31943 (+)
Type: TC
Location: 30489 - 31943 (+)
Gene ID: k141_28893_29
Type: CAZyme
Location: 32026 - 32955 (+)
Type: CAZyme
Location: 32026 - 32955 (+)
Gene ID: k141_28893_30
Type: CAZyme
Location: 33044 - 33943 (+)
Type: CAZyme
Location: 33044 - 33943 (+)
Gene ID: k141_28893_31
Type: CAZyme
Location: 33948 - 34853 (+)
Type: CAZyme
Location: 33948 - 34853 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Weissella
Species
Weissella sagaensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.