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Cluster: CGMR040139_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_28893 k141_28893_7 6167 8101 + 4.A.1.2.6
CAZyme k141_28893 k141_28893_8 8121 9587 + GH1
CAZyme k141_28893 k141_28893_9 9825 10958 + GH3
sulfatase k141_28893 k141_28893_10 10945 12042 + S1_15
CAZyme k141_28893 k141_28893_11 12191 13135 + GH13_31
pfam k141_28893 k141_28893_12 13166 13864 + Alpha-amylase
CAZyme k141_28893 k141_28893_13 13966 14700 + CE1
pfam k141_28893 k141_28893_14 14721 15557 + adh_short | Epimerase | KR | adh_short_C2
pfam k141_28893 k141_28893_15 15636 15965 - ABM
CAZyme k141_28893 k141_28893_16 16136 18460 + GH31_15
Gene ID: k141_28893_7
Type: TC
Location: 6167 - 8101 (+)
Gene ID: k141_28893_8
Type: CAZyme
Location: 8121 - 9587 (+)
Gene ID: k141_28893_9
Type: CAZyme
Location: 9825 - 10958 (+)
Gene ID: k141_28893_10
Type: sulfatase
Location: 10945 - 12042 (+)
Gene ID: k141_28893_11
Type: CAZyme
Location: 12191 - 13135 (+)
Gene ID: k141_28893_12
Type: pfam
Location: 13166 - 13864 (+)
Gene ID: k141_28893_13
Type: CAZyme
Location: 13966 - 14700 (+)
Gene ID: k141_28893_14
Type: pfam
Location: 14721 - 15557 (+)
Gene ID: k141_28893_15
Type: pfam
Location: 15636 - 15965 (-)
Gene ID: k141_28893_16
Type: CAZyme
Location: 16136 - 18460 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Lactobacillaceae
→
Genus
Weissella
→
Species
Weissella sagaensis

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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