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Cluster: CGMR040139_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_360520 k141_360520_58 56671 58020 - 2.A.3.1.16
pfam k141_360520 k141_360520_59 58290 58700 - DUF6508
pfam k141_360520 k141_360520_60 58768 60213 - Glu_cys_ligase | Glu_cys_ligase
TC k141_360520 k141_360520_61 60313 61464 - 2.A.86.1.8
pfam k141_360520 k141_360520_62 61718 62614 - UbiA
pfam k141_360520 k141_360520_63 62709 62984 - Acylphosphatase
TC k141_360520 k141_360520_64 63071 63883 - 3.A.1.3.28
TC k141_360520 k141_360520_65 64300 65001 + 3.A.1.3.28
TC k141_360520 k141_360520_66 65007 65759 + 3.A.1.3.15
STP k141_360520 k141_360520_67 65799 66380 - TetR_N
TC k141_360520 k141_360520_68 66538 67395 + 8.A.5.1.4
pfam k141_360520 k141_360520_69 67495 68424 - Ldh_1_N | Ldh_1_C | F420_oxidored
STP k141_360520 k141_360520_70 68443 69603 - Aminotran_1_2
CAZyme k141_360520 k141_360520_71 69623 70993 - AA4
TC k141_360520 k141_360520_72 71364 72188 - 3.A.1.29.1
TC k141_360520 k141_360520_73 72192 73883 - 3.A.1.29.1
TC k141_360520 k141_360520_74 73945 74505 - 3.A.1.29.1
pfam k141_360520 k141_360520_75 74643 76082 - TRAM | tRNA_U5-meth_tr
pfam k141_360520 k141_360520_76 76113 76787 - RelA_SpoT
TC k141_360520 k141_360520_77 76969 78048 - 3.A.1.2.17
Gene ID: k141_360520_58
Type: TC
Location: 56671 - 58020 (-)
Gene ID: k141_360520_59
Type: pfam
Location: 58290 - 58700 (-)
Gene ID: k141_360520_60
Type: pfam
Location: 58768 - 60213 (-)
Gene ID: k141_360520_61
Type: TC
Location: 60313 - 61464 (-)
Gene ID: k141_360520_62
Type: pfam
Location: 61718 - 62614 (-)
Gene ID: k141_360520_63
Type: pfam
Location: 62709 - 62984 (-)
Gene ID: k141_360520_64
Type: TC
Location: 63071 - 63883 (-)
Gene ID: k141_360520_65
Type: TC
Location: 64300 - 65001 (+)
Gene ID: k141_360520_66
Type: TC
Location: 65007 - 65759 (+)
Gene ID: k141_360520_67
Type: STP
Location: 65799 - 66380 (-)
Gene ID: k141_360520_68
Type: TC
Location: 66538 - 67395 (+)
Gene ID: k141_360520_69
Type: pfam
Location: 67495 - 68424 (-)
Gene ID: k141_360520_70
Type: STP
Location: 68443 - 69603 (-)
Gene ID: k141_360520_71
Type: CAZyme
Location: 69623 - 70993 (-)
Gene ID: k141_360520_72
Type: TC
Location: 71364 - 72188 (-)
Gene ID: k141_360520_73
Type: TC
Location: 72192 - 73883 (-)
Gene ID: k141_360520_74
Type: TC
Location: 73945 - 74505 (-)
Gene ID: k141_360520_75
Type: pfam
Location: 74643 - 76082 (-)
Gene ID: k141_360520_76
Type: pfam
Location: 76113 - 76787 (-)
Gene ID: k141_360520_77
Type: TC
Location: 76969 - 78048 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Lactobacillaceae
→
Genus
Weissella
→
Species
Weissella sagaensis

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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