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Cluster: CGMR040139_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_356713 k141_356713_2 1175 3061 + 9.B.97.5.1
TF k141_356713 k141_356713_3 3197 3658 + MarR
pfam k141_356713 k141_356713_4 3655 4575 + ZnuA
TC k141_356713 k141_356713_5 4572 5264 + 3.A.1.15.12
pfam k141_356713 k141_356713_6 5257 6039 + ABC-3
TC k141_356713 k141_356713_7 6179 7810 + 3.A.1.121.4
TC k141_356713 k141_356713_8 8137 9507 + 2.A.1.1.116
TC k141_356713 k141_356713_9 9670 11010 + 2.A.66.1.4
TF k141_356713 k141_356713_10 11087 11977 - HTH_5
CAZyme k141_356713 k141_356713_11 12208 13176 + GH43_26
TC k141_356713 k141_356713_12 13198 14469 + 2.A.1.5.2
CAZyme k141_356713 k141_356713_13 14521 16017 + GH51_1
Gene ID: k141_356713_2
Type: TC
Location: 1175 - 3061 (+)
Gene ID: k141_356713_3
Type: TF
Location: 3197 - 3658 (+)
Gene ID: k141_356713_4
Type: pfam
Location: 3655 - 4575 (+)
Gene ID: k141_356713_5
Type: TC
Location: 4572 - 5264 (+)
Gene ID: k141_356713_6
Type: pfam
Location: 5257 - 6039 (+)
Gene ID: k141_356713_7
Type: TC
Location: 6179 - 7810 (+)
Gene ID: k141_356713_8
Type: TC
Location: 8137 - 9507 (+)
Gene ID: k141_356713_9
Type: TC
Location: 9670 - 11010 (+)
Gene ID: k141_356713_10
Type: TF
Location: 11087 - 11977 (-)
Gene ID: k141_356713_11
Type: CAZyme
Location: 12208 - 13176 (+)
Gene ID: k141_356713_12
Type: TC
Location: 13198 - 14469 (+)
Gene ID: k141_356713_13
Type: CAZyme
Location: 14521 - 16017 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Lactobacillaceae
→
Genus
Weissella
→
Species
Weissella sagaensis

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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