Cluster: CGMR040139_CGC11
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR040139
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_59008 | k141_59008_197 | 188540 | 189892 | - | 2.A.40.7.2 |
| pfam | k141_59008 | k141_59008_198 | 190071 | 191081 | + | A_deaminase |
| pfam | k141_59008 | k141_59008_199 | 191135 | 191869 | - | adh_short | KR | adh_short_C2 |
| TC | k141_59008 | k141_59008_200 | 192063 | 193850 | - | 3.A.1.135.8 |
| TC | k141_59008 | k141_59008_201 | 193840 | 195567 | - | 3.A.1.135.8 |
| CAZyme | k141_59008 | k141_59008_202 | 195753 | 196847 | - | GH170 |
| TC | k141_59008 | k141_59008_203 | 196949 | 197266 | - | 4.A.3.2.4 |
| TC | k141_59008 | k141_59008_204 | 197430 | 198722 | - | 4.A.3.2.2 |
| CAZyme | k141_59008 | k141_59008_205 | 198769 | 200220 | - | GH1 |
| TC | k141_59008 | k141_59008_206 | 200225 | 200551 | - | 4.A.3.2.4 |
| TC | k141_59008 | k141_59008_207 | 200576 | 200893 | - | 4.A.3.2.4 |
| CAZyme | k141_59008 | k141_59008_208 | 200914 | 202371 | - | GH1 |
Gene ID: k141_59008_197
Type: TC
Location: 188540 - 189892 (-)
Type: TC
Location: 188540 - 189892 (-)
Gene ID: k141_59008_198
Type: pfam
Location: 190071 - 191081 (+)
Type: pfam
Location: 190071 - 191081 (+)
Gene ID: k141_59008_199
Type: pfam
Location: 191135 - 191869 (-)
Type: pfam
Location: 191135 - 191869 (-)
Gene ID: k141_59008_200
Type: TC
Location: 192063 - 193850 (-)
Type: TC
Location: 192063 - 193850 (-)
Gene ID: k141_59008_201
Type: TC
Location: 193840 - 195567 (-)
Type: TC
Location: 193840 - 195567 (-)
Gene ID: k141_59008_202
Type: CAZyme
Location: 195753 - 196847 (-)
Type: CAZyme
Location: 195753 - 196847 (-)
Gene ID: k141_59008_203
Type: TC
Location: 196949 - 197266 (-)
Type: TC
Location: 196949 - 197266 (-)
Gene ID: k141_59008_204
Type: TC
Location: 197430 - 198722 (-)
Type: TC
Location: 197430 - 198722 (-)
Gene ID: k141_59008_205
Type: CAZyme
Location: 198769 - 200220 (-)
Type: CAZyme
Location: 198769 - 200220 (-)
Gene ID: k141_59008_206
Type: TC
Location: 200225 - 200551 (-)
Type: TC
Location: 200225 - 200551 (-)
Gene ID: k141_59008_207
Type: TC
Location: 200576 - 200893 (-)
Type: TC
Location: 200576 - 200893 (-)
Gene ID: k141_59008_208
Type: CAZyme
Location: 200914 - 202371 (-)
Type: CAZyme
Location: 200914 - 202371 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Weissella
Species
Weissella sagaensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.