Cluster: CGMR040139_CGC1
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR040139
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_127844 | k141_127844_3 | 2152 | 3336 | - | 2.A.103.1.6 |
| pfam | k141_127844 | k141_127844_4 | 3365 | 3574 | - | DUF2969 |
| TC | k141_127844 | k141_127844_5 | 3587 | 4567 | - | 9.B.157.1.1 |
| pfam | k141_127844 | k141_127844_6 | 4750 | 6120 | + | Mur_ligase_C | Mur_ligase_M |
| pfam | k141_127844 | k141_127844_7 | 6169 | 6978 | - | S6PP | S6PP | Hydrolase_3 |
| TC | k141_127844 | k141_127844_8 | 7142 | 8098 | - | 3.A.1.2.12 |
| TC | k141_127844 | k141_127844_9 | 8101 | 9225 | - | 3.A.1.2.12 |
| TC | k141_127844 | k141_127844_10 | 9230 | 10780 | - | 3.A.1.2.17 |
| TC | k141_127844 | k141_127844_11 | 11001 | 12080 | - | 3.A.1.2.12 |
| TC | k141_127844 | k141_127844_12 | 12518 | 13570 | + | 2.A.86.1.10 |
| TC | k141_127844 | k141_127844_13 | 13629 | 14960 | - | 2.A.8.1.1 |
| pfam | k141_127844 | k141_127844_14 | 15166 | 15945 | - | adh_short | Epimerase | KR | adh_short_C2 |
| pfam | k141_127844 | k141_127844_15 | 15966 | 16424 | - | ASCH |
| CAZyme | k141_127844 | k141_127844_16 | 16547 | 18748 | - | GH36 |
| TC | k141_127844 | k141_127844_17 | 18748 | 20715 | - | 2.A.2.2.2 |
Gene ID: k141_127844_3
Type: TC
Location: 2152 - 3336 (-)
Type: TC
Location: 2152 - 3336 (-)
Gene ID: k141_127844_4
Type: pfam
Location: 3365 - 3574 (-)
Type: pfam
Location: 3365 - 3574 (-)
Gene ID: k141_127844_5
Type: TC
Location: 3587 - 4567 (-)
Type: TC
Location: 3587 - 4567 (-)
Gene ID: k141_127844_6
Type: pfam
Location: 4750 - 6120 (+)
Type: pfam
Location: 4750 - 6120 (+)
Gene ID: k141_127844_7
Type: pfam
Location: 6169 - 6978 (-)
Type: pfam
Location: 6169 - 6978 (-)
Gene ID: k141_127844_8
Type: TC
Location: 7142 - 8098 (-)
Type: TC
Location: 7142 - 8098 (-)
Gene ID: k141_127844_9
Type: TC
Location: 8101 - 9225 (-)
Type: TC
Location: 8101 - 9225 (-)
Gene ID: k141_127844_10
Type: TC
Location: 9230 - 10780 (-)
Type: TC
Location: 9230 - 10780 (-)
Gene ID: k141_127844_11
Type: TC
Location: 11001 - 12080 (-)
Type: TC
Location: 11001 - 12080 (-)
Gene ID: k141_127844_12
Type: TC
Location: 12518 - 13570 (+)
Type: TC
Location: 12518 - 13570 (+)
Gene ID: k141_127844_13
Type: TC
Location: 13629 - 14960 (-)
Type: TC
Location: 13629 - 14960 (-)
Gene ID: k141_127844_14
Type: pfam
Location: 15166 - 15945 (-)
Type: pfam
Location: 15166 - 15945 (-)
Gene ID: k141_127844_15
Type: pfam
Location: 15966 - 16424 (-)
Type: pfam
Location: 15966 - 16424 (-)
Gene ID: k141_127844_16
Type: CAZyme
Location: 16547 - 18748 (-)
Type: CAZyme
Location: 16547 - 18748 (-)
Gene ID: k141_127844_17
Type: TC
Location: 18748 - 20715 (-)
Type: TC
Location: 18748 - 20715 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Weissella
Species
Weissella sagaensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.