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Cluster: CGMR039899_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_142216 k141_142216_4 3160 7011 + 9.B.34.1.2
pfam k141_142216 k141_142216_5 7343 10453 + tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | DUF5915
pfam k141_142216 k141_142216_6 10582 12561 + Transketolase_N | Transket_pyr | Transketolase_C | Transketolase_C_1
TC k141_142216 k141_142216_7 12618 13493 - 2.A.120.1.11
pfam k141_142216 k141_142216_8 13650 14543 + AA_kinase
pfam k141_142216 k141_142216_9 14561 15283 + TM1586_NiRdase
TC k141_142216 k141_142216_10 15359 16327 - 3.A.1.2.15
TC k141_142216 k141_142216_11 16311 17804 - 3.A.1.2.20
CAZyme k141_142216 k141_142216_12 17867 19042 - GH179
Gene ID: k141_142216_4
Type: TC
Location: 3160 - 7011 (+)
Gene ID: k141_142216_5
Type: pfam
Location: 7343 - 10453 (+)
Gene ID: k141_142216_6
Type: pfam
Location: 10582 - 12561 (+)
Gene ID: k141_142216_7
Type: TC
Location: 12618 - 13493 (-)
Gene ID: k141_142216_8
Type: pfam
Location: 13650 - 14543 (+)
Gene ID: k141_142216_9
Type: pfam
Location: 14561 - 15283 (+)
Gene ID: k141_142216_10
Type: TC
Location: 15359 - 16327 (-)
Gene ID: k141_142216_11
Type: TC
Location: 16311 - 17804 (-)
Gene ID: k141_142216_12
Type: CAZyme
Location: 17867 - 19042 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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