dbCAN Logo

Cluster: CGMR039899_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_43286 k141_43286_24 43115 44392 + GT2
pfam k141_43286 k141_43286_25 44492 45745 + Fe_hyd_lg_C
TC k141_43286 k141_43286_26 45829 47472 + 4.C.1.1.14
pfam k141_43286 k141_43286_27 47478 47705 + PP-binding
NULL(UNKNOWN) k141_43286 k141_43286_28 47769 49253 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_43286 k141_43286_29 49302 50630 - 8.A.59.2.1
TF k141_43286 k141_43286_30 50647 52251 - HTH_AraC | HTH_AraC
TC k141_43286 k141_43286_31 52286 53713 - 3.A.1.2.19
TC k141_43286 k141_43286_32 54039 55151 + 3.A.1.2.13
TC k141_43286 k141_43286_33 55219 56736 + 3.A.1.2.20
TC k141_43286 k141_43286_34 56755 57786 + 3.A.1.2.1
TC k141_43286 k141_43286_35 57786 58748 + 3.A.1.2.1
Gene ID: k141_43286_24
Type: CAZyme
Location: 43115 - 44392 (+)
Gene ID: k141_43286_25
Type: pfam
Location: 44492 - 45745 (+)
Gene ID: k141_43286_26
Type: TC
Location: 45829 - 47472 (+)
Gene ID: k141_43286_27
Type: pfam
Location: 47478 - 47705 (+)
Gene ID: k141_43286_28
Type:
Location: 47769 - 49253 (+)
Gene ID: k141_43286_29
Type: TC
Location: 49302 - 50630 (-)
Gene ID: k141_43286_30
Type: TF
Location: 50647 - 52251 (-)
Gene ID: k141_43286_31
Type: TC
Location: 52286 - 53713 (-)
Gene ID: k141_43286_32
Type: TC
Location: 54039 - 55151 (+)
Gene ID: k141_43286_33
Type: TC
Location: 55219 - 56736 (+)
Gene ID: k141_43286_34
Type: TC
Location: 56755 - 57786 (+)
Gene ID: k141_43286_35
Type: TC
Location: 57786 - 58748 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List