dbCAN Logo

Cluster: CGMR039712_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_230413 k141_230413_79 92461 93312 - 3.A.1.24.5
TC k141_230413 k141_230413_80 93429 94106 - 3.A.1.24.5
TC k141_230413 k141_230413_81 94108 95025 - 3.A.1.24.2
TF k141_230413 k141_230413_82 95388 96626 - GerE | HTH_1
TC k141_230413 k141_230413_83 96814 98226 - 2.A.47.1.8
TC k141_230413 k141_230413_84 98271 99086 - 5.A.3.7.1
TC k141_230413 k141_230413_85 99092 101701 - 5.A.3.7.1
pfam k141_230413 k141_230413_86 101747 103045 - Sugar_tr | MFS_1
CAZyme k141_230413 k141_230413_87 103351 104541 + GT4
STP k141_230413 k141_230413_88 104594 105829 + Aminotran_1_2
TC k141_230413 k141_230413_89 105829 106431 + 9.B.18.1.2
TC k141_230413 k141_230413_90 106440 107693 - 9.A.28.1.1
Gene ID: k141_230413_79
Type: TC
Location: 92461 - 93312 (-)
Gene ID: k141_230413_80
Type: TC
Location: 93429 - 94106 (-)
Gene ID: k141_230413_81
Type: TC
Location: 94108 - 95025 (-)
Gene ID: k141_230413_82
Type: TF
Location: 95388 - 96626 (-)
Gene ID: k141_230413_83
Type: TC
Location: 96814 - 98226 (-)
Gene ID: k141_230413_84
Type: TC
Location: 98271 - 99086 (-)
Gene ID: k141_230413_85
Type: TC
Location: 99092 - 101701 (-)
Gene ID: k141_230413_86
Type: pfam
Location: 101747 - 103045 (-)
Gene ID: k141_230413_87
Type: CAZyme
Location: 103351 - 104541 (+)
Gene ID: k141_230413_88
Type: STP
Location: 104594 - 105829 (+)
Gene ID: k141_230413_89
Type: TC
Location: 105829 - 106431 (+)
Gene ID: k141_230413_90
Type: TC
Location: 106440 - 107693 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List