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Cluster: CGMR039487_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_439592 k141_439592_1 270 881 - 2.A.115.2.14
pfam k141_439592 k141_439592_2 1008 4703 - RNA_pol_Rpb1_2 | RNA_pol_Rpb1_3 | RNA_pol_Rpb1_1 | RNA_pol_Rpb1_5 | RNA_pol_Rpb1_4
pfam k141_439592 k141_439592_3 4756 8655 - RNA_pol_Rpb2_6 | RNA_pol_Rpb2_7 | RNA_pol_Rpb2_2 | RNA_pol_Rpb2_2 | RNA_pol_Rpb2_1 | RNA_pol_Rpb2_3 | RNA_pol_Rpb2_45
CAZyme k141_439592 k141_439592_4 9066 11399 + GH3
STP k141_439592 k141_439592_5 11491 12204 - Fer4
NULL(UNKNOWN) k141_439592 k141_439592_6 12164 12397 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_439592 k141_439592_7 12476 13831 + 2.A.22.5.3
TC k141_439592 k141_439592_8 14006 15325 - 2.A.23.1.2
Gene ID: k141_439592_1
Type: TC
Location: 270 - 881 (-)
Gene ID: k141_439592_2
Type: pfam
Location: 1008 - 4703 (-)
Gene ID: k141_439592_3
Type: pfam
Location: 4756 - 8655 (-)
Gene ID: k141_439592_4
Type: CAZyme
Location: 9066 - 11399 (+)
Gene ID: k141_439592_5
Type: STP
Location: 11491 - 12204 (-)
Gene ID: k141_439592_6
Type:
Location: 12164 - 12397 (-)
Gene ID: k141_439592_7
Type: TC
Location: 12476 - 13831 (+)
Gene ID: k141_439592_8
Type: TC
Location: 14006 - 15325 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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