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Cluster: CGMR039487_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_423470 k141_423470_42 36768 38636 - 3.A.1.111.2
TC k141_423470 k141_423470_43 38629 40500 - 3.A.1.201.3
NULL(UNKNOWN) k141_423470 k141_423470_44 40743 41495 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_423470 k141_423470_45 41717 44359 - 4.A.2.1.17
pfam k141_423470 k141_423470_46 44623 45012 - bPH_2
CAZyme k141_423470 k141_423470_47 45264 48587 - GH3
pfam k141_423470 k141_423470_48 48734 50131 - tRNA-synt_2b | HGTP_anticodon
NULL(UNKNOWN) k141_423470 k141_423470_49 50398 50973 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_423470 k141_423470_50 51061 51693 - 3.A.1.124.4
Gene ID: k141_423470_42
Type: TC
Location: 36768 - 38636 (-)
Gene ID: k141_423470_43
Type: TC
Location: 38629 - 40500 (-)
Gene ID: k141_423470_44
Type:
Location: 40743 - 41495 (-)
Gene ID: k141_423470_45
Type: TC
Location: 41717 - 44359 (-)
Gene ID: k141_423470_46
Type: pfam
Location: 44623 - 45012 (-)
Gene ID: k141_423470_47
Type: CAZyme
Location: 45264 - 48587 (-)
Gene ID: k141_423470_48
Type: pfam
Location: 48734 - 50131 (-)
Gene ID: k141_423470_49
Type:
Location: 50398 - 50973 (-)
Gene ID: k141_423470_50
Type: TC
Location: 51061 - 51693 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_423470_42 vegan > omnivore 1.87759 0.00313
k141_423470_42 vegetarian > omnivore 2.05503 0.00341
k141_423470_43 vegan > omnivore 2.06515 0.00313
k141_423470_43 vegetarian > omnivore 2.18385 0.00341

🧭 Explore Read Mapping of CGC

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