Cluster: CGMR039260_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR039260
- CGC Family ID: CGCFAM_02160
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_37784 | k141_37784_6 | 4926 | 6659 | - | GH2 |
| CAZyme | k141_37784 | k141_37784_7 | 6675 | 9098 | - | GH43_32 |
| CAZyme | k141_37784 | k141_37784_8 | 9203 | 11701 | - | CBM66 | GH43_32 |
| pfam | k141_37784 | k141_37784_9 | 11714 | 15502 | - | CBM9_1 | CarboxypepD_reg | CarboxypepD_reg | CarboxypepD_reg |
| TC | k141_37784 | k141_37784_10 | 15533 | 16414 | - | 3.A.1.1.34 |
| TC | k141_37784 | k141_37784_11 | 16427 | 17365 | - | 3.A.1.1.34 |
Gene ID: k141_37784_6
Type: CAZyme
Location: 4926 - 6659 (-)
Type: CAZyme
Location: 4926 - 6659 (-)
Gene ID: k141_37784_7
Type: CAZyme
Location: 6675 - 9098 (-)
Type: CAZyme
Location: 6675 - 9098 (-)
Gene ID: k141_37784_8
Type: CAZyme
Location: 9203 - 11701 (-)
Type: CAZyme
Location: 9203 - 11701 (-)
Gene ID: k141_37784_9
Type: pfam
Location: 11714 - 15502 (-)
Type: pfam
Location: 11714 - 15502 (-)
Gene ID: k141_37784_10
Type: TC
Location: 15533 - 16414 (-)
Type: TC
Location: 15533 - 16414 (-)
Gene ID: k141_37784_11
Type: TC
Location: 16427 - 17365 (-)
Type: TC
Location: 16427 - 17365 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.