Cluster: CGMR039260_CGC17
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR039260
- CGC Family ID: CGCFAM_01973
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_23108 | k141_23108_23 | 26996 | 28117 | - | CE2 |
| CAZyme | k141_23108 | k141_23108_24 | 28135 | 29376 | - | CE2 |
| CAZyme | k141_23108 | k141_23108_25 | 29373 | 30479 | - | GH5_13 |
| CAZyme | k141_23108 | k141_23108_26 | 30523 | 32301 | - | GH2 |
| TC | k141_23108 | k141_23108_27 | 32304 | 33182 | - | 3.A.1.1.34 |
| TC | k141_23108 | k141_23108_28 | 33193 | 34161 | - | 3.A.1.1.11 |
| STP | k141_23108 | k141_23108_29 | 34213 | 35757 | - | SBP_bac_1 |
| CAZyme | k141_23108 | k141_23108_30 | 35800 | 38439 | - | GH43_32 |
Gene ID: k141_23108_23
Type: CAZyme
Location: 26996 - 28117 (-)
Type: CAZyme
Location: 26996 - 28117 (-)
Gene ID: k141_23108_24
Type: CAZyme
Location: 28135 - 29376 (-)
Type: CAZyme
Location: 28135 - 29376 (-)
Gene ID: k141_23108_25
Type: CAZyme
Location: 29373 - 30479 (-)
Type: CAZyme
Location: 29373 - 30479 (-)
Gene ID: k141_23108_26
Type: CAZyme
Location: 30523 - 32301 (-)
Type: CAZyme
Location: 30523 - 32301 (-)
Gene ID: k141_23108_27
Type: TC
Location: 32304 - 33182 (-)
Type: TC
Location: 32304 - 33182 (-)
Gene ID: k141_23108_28
Type: TC
Location: 33193 - 34161 (-)
Type: TC
Location: 33193 - 34161 (-)
Gene ID: k141_23108_29
Type: STP
Location: 34213 - 35757 (-)
Type: STP
Location: 34213 - 35757 (-)
Gene ID: k141_23108_30
Type: CAZyme
Location: 35800 - 38439 (-)
Type: CAZyme
Location: 35800 - 38439 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Gallimonas
Species
Gallimonas intestinalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.