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Cluster: CGMR039260_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_111588 k141_111588_10 13581 14468 - 3.A.1.1.20
TC k141_111588 k141_111588_11 14480 15445 - 3.A.1.1.34
STP k141_111588 k141_111588_12 15477 17144 - SBP_bac_1
TF k141_111588 k141_111588_13 17340 18455 + GntR
TC k141_111588 k141_111588_14 18751 19596 - 3.A.1.1.27
TC k141_111588 k141_111588_15 19593 20921 - 3.A.1.1.27
STP k141_111588 k141_111588_16 20932 22401 - SBP_bac_1
CAZyme k141_111588 k141_111588_17 22404 24062 - CBM34 | GH13_20
pfam k141_111588 k141_111588_18 24131 25801 - Flg_new
TF k141_111588 k141_111588_19 25979 27052 + LacI | LacI
CAZyme k141_111588 k141_111588_20 27225 28595 - GH32
Gene ID: k141_111588_10
Type: TC
Location: 13581 - 14468 (-)
Gene ID: k141_111588_11
Type: TC
Location: 14480 - 15445 (-)
Gene ID: k141_111588_12
Type: STP
Location: 15477 - 17144 (-)
Gene ID: k141_111588_13
Type: TF
Location: 17340 - 18455 (+)
Gene ID: k141_111588_14
Type: TC
Location: 18751 - 19596 (-)
Gene ID: k141_111588_15
Type: TC
Location: 19593 - 20921 (-)
Gene ID: k141_111588_16
Type: STP
Location: 20932 - 22401 (-)
Gene ID: k141_111588_17
Type: CAZyme
Location: 22404 - 24062 (-)
Gene ID: k141_111588_18
Type: pfam
Location: 24131 - 25801 (-)
Gene ID: k141_111588_19
Type: TF
Location: 25979 - 27052 (+)
Gene ID: k141_111588_20
Type: CAZyme
Location: 27225 - 28595 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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