Cluster: CGMR038742_CGC31
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR038742
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_4234 | k141_4234_97 | 93325 | 95262 | - | 4.A.2.1.4 |
| TF | k141_4234 | k141_4234_98 | 95281 | 97149 | - | HTH_11 | Mga |
| TF | k141_4234 | k141_4234_99 | 97311 | 97853 | - | HTH_3 |
| TC | k141_4234 | k141_4234_100 | 97989 | 98966 | - | 3.A.1.17.10 |
| TC | k141_4234 | k141_4234_101 | 98966 | 100483 | - | 4.C.1.1.7 |
| pfam | k141_4234 | k141_4234_102 | 100440 | 101051 | - | Acyl_transf_3 |
| TC | k141_4234 | k141_4234_103 | 101103 | 101651 | - | 9.B.97.1.5 |
| pfam | k141_4234 | k141_4234_104 | 101838 | 103235 | - | Lyase_1 | ASL_C2 |
| pfam | k141_4234 | k141_4234_105 | 103232 | 104473 | - | Arginosuc_synth | Arginosuc_syn_C |
| CAZyme | k141_4234 | k141_4234_106 | 104605 | 106923 | - | GH65 |
| TC | k141_4234 | k141_4234_107 | 107152 | 108498 | - | 4.A.3.2.2 |
| pfam | k141_4234 | k141_4234_108 | 108641 | 109546 | - | ROK |
| CAZyme | k141_4234 | k141_4234_109 | 109543 | 110979 | - | GH1 |
| TF | k141_4234 | k141_4234_110 | 111183 | 111929 | - | HTH_6 |
| sulfatase | k141_4234 | k141_4234_111 | 111940 | 112749 | - | S1_4 |
| CAZyme | k141_4234 | k141_4234_112 | 113025 | 115181 | - | GH65 |
Gene ID: k141_4234_97
Type: TC
Location: 93325 - 95262 (-)
Type: TC
Location: 93325 - 95262 (-)
Gene ID: k141_4234_98
Type: TF
Location: 95281 - 97149 (-)
Type: TF
Location: 95281 - 97149 (-)
Gene ID: k141_4234_99
Type: TF
Location: 97311 - 97853 (-)
Type: TF
Location: 97311 - 97853 (-)
Gene ID: k141_4234_100
Type: TC
Location: 97989 - 98966 (-)
Type: TC
Location: 97989 - 98966 (-)
Gene ID: k141_4234_101
Type: TC
Location: 98966 - 100483 (-)
Type: TC
Location: 98966 - 100483 (-)
Gene ID: k141_4234_102
Type: pfam
Location: 100440 - 101051 (-)
Type: pfam
Location: 100440 - 101051 (-)
Gene ID: k141_4234_103
Type: TC
Location: 101103 - 101651 (-)
Type: TC
Location: 101103 - 101651 (-)
Gene ID: k141_4234_104
Type: pfam
Location: 101838 - 103235 (-)
Type: pfam
Location: 101838 - 103235 (-)
Gene ID: k141_4234_105
Type: pfam
Location: 103232 - 104473 (-)
Type: pfam
Location: 103232 - 104473 (-)
Gene ID: k141_4234_106
Type: CAZyme
Location: 104605 - 106923 (-)
Type: CAZyme
Location: 104605 - 106923 (-)
Gene ID: k141_4234_107
Type: TC
Location: 107152 - 108498 (-)
Type: TC
Location: 107152 - 108498 (-)
Gene ID: k141_4234_108
Type: pfam
Location: 108641 - 109546 (-)
Type: pfam
Location: 108641 - 109546 (-)
Gene ID: k141_4234_109
Type: CAZyme
Location: 109543 - 110979 (-)
Type: CAZyme
Location: 109543 - 110979 (-)
Gene ID: k141_4234_110
Type: TF
Location: 111183 - 111929 (-)
Type: TF
Location: 111183 - 111929 (-)
Gene ID: k141_4234_111
Type: sulfatase
Location: 111940 - 112749 (-)
Type: sulfatase
Location: 111940 - 112749 (-)
Gene ID: k141_4234_112
Type: CAZyme
Location: 113025 - 115181 (-)
Type: CAZyme
Location: 113025 - 115181 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Companilactobacillus
Species
Companilactobacillus nuruki
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.