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Cluster: CGMR038742_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_195757 k141_195757_23 24571 26433 - 4.A.1.2.11
pfam k141_195757 k141_195757_24 26476 26970 - LacAB_rpiB
pfam k141_195757 k141_195757_25 26976 27626 - Ribul_P_3_epim
CAZyme k141_195757 k141_195757_26 27665 29086 - GH1
TF k141_195757 k141_195757_27 29204 30205 + LacI
TC k141_195757 k141_195757_28 30241 30483 - 4.A.1.1.12
pfam k141_195757 k141_195757_29 30471 30704 - PTS_EIIA_1
TF k141_195757 k141_195757_30 30715 31461 - HTH_DeoR
TC k141_195757 k141_195757_31 31549 32916 - 4.A.1.2.11
pfam k141_195757 k141_195757_32 32941 33876 - AP_endonuc_2
pfam k141_195757 k141_195757_33 34023 35018 - ADH_zinc_N | ADH_N | ADH_zinc_N_2
TC k141_195757 k141_195757_34 35187 36569 + 2.A.1.4.1
Gene ID: k141_195757_23
Type: TC
Location: 24571 - 26433 (-)
Gene ID: k141_195757_24
Type: pfam
Location: 26476 - 26970 (-)
Gene ID: k141_195757_25
Type: pfam
Location: 26976 - 27626 (-)
Gene ID: k141_195757_26
Type: CAZyme
Location: 27665 - 29086 (-)
Gene ID: k141_195757_27
Type: TF
Location: 29204 - 30205 (+)
Gene ID: k141_195757_28
Type: TC
Location: 30241 - 30483 (-)
Gene ID: k141_195757_29
Type: pfam
Location: 30471 - 30704 (-)
Gene ID: k141_195757_30
Type: TF
Location: 30715 - 31461 (-)
Gene ID: k141_195757_31
Type: TC
Location: 31549 - 32916 (-)
Gene ID: k141_195757_32
Type: pfam
Location: 32941 - 33876 (-)
Gene ID: k141_195757_33
Type: pfam
Location: 34023 - 35018 (-)
Gene ID: k141_195757_34
Type: TC
Location: 35187 - 36569 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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