dbCAN Logo

Cluster: CGMR038742_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_139850 k141_139850_90 90549 90857 + 4.A.3.2.4
TC k141_139850 k141_139850_91 90953 91288 + 4.A.3.2.8
pfam k141_139850 k141_139850_92 91294 91695 + Glyco_hydro_1
CAZyme k141_139850 k141_139850_93 91646 92737 + GH1
CAZyme k141_139850 k141_139850_94 92768 94222 + GH1
TF k141_139850 k141_139850_95 94361 95134 + HTH_6
TC k141_139850 k141_139850_96 95274 96578 + 4.A.3.2.2
CAZyme k141_139850 k141_139850_97 96605 97690 + GH170
pfam k141_139850 k141_139850_98 97745 98908 + Acetyltransf_9 | SCP2_2 | Acetyltransf_17
TC k141_139850 k141_139850_99 99041 100168 + 9.B.34.1.3
NULL(UNKNOWN) k141_139850 k141_139850_100 100261 100590 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_139850 k141_139850_101 100637 101383 + 9.B.34.1.3
Gene ID: k141_139850_90
Type: TC
Location: 90549 - 90857 (+)
Gene ID: k141_139850_91
Type: TC
Location: 90953 - 91288 (+)
Gene ID: k141_139850_92
Type: pfam
Location: 91294 - 91695 (+)
Gene ID: k141_139850_93
Type: CAZyme
Location: 91646 - 92737 (+)
Gene ID: k141_139850_94
Type: CAZyme
Location: 92768 - 94222 (+)
Gene ID: k141_139850_95
Type: TF
Location: 94361 - 95134 (+)
Gene ID: k141_139850_96
Type: TC
Location: 95274 - 96578 (+)
Gene ID: k141_139850_97
Type: CAZyme
Location: 96605 - 97690 (+)
Gene ID: k141_139850_98
Type: pfam
Location: 97745 - 98908 (+)
Gene ID: k141_139850_99
Type: TC
Location: 99041 - 100168 (+)
Gene ID: k141_139850_100
Type:
Location: 100261 - 100590 (+)
Gene ID: k141_139850_101
Type: TC
Location: 100637 - 101383 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List