Cluster: CGMR038390_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR038390
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1166562 | k141_1166562_9 | 10541 | 11323 | + | 3.A.1.5.22 |
| STP | k141_1166562 | k141_1166562_10 | 11413 | 13932 | + | TPR_1 |
| TC | k141_1166562 | k141_1166562_11 | 14016 | 16028 | + | 2.A.111.2.1 |
| pfam | k141_1166562 | k141_1166562_12 | 16043 | 16636 | + | Lum_binding | Lum_binding |
| NULL(UNKNOWN) | k141_1166562 | k141_1166562_13 | 16656 | 16940 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_1166562 | k141_1166562_14 | 16993 | 19059 | + | GH33 |
| CAZyme | k141_1166562 | k141_1166562_15 | 19167 | 20138 | + | GT32 |
Gene ID: k141_1166562_9
Type: TC
Location: 10541 - 11323 (+)
Type: TC
Location: 10541 - 11323 (+)
Gene ID: k141_1166562_10
Type: STP
Location: 11413 - 13932 (+)
Type: STP
Location: 11413 - 13932 (+)
Gene ID: k141_1166562_11
Type: TC
Location: 14016 - 16028 (+)
Type: TC
Location: 14016 - 16028 (+)
Gene ID: k141_1166562_12
Type: pfam
Location: 16043 - 16636 (+)
Type: pfam
Location: 16043 - 16636 (+)
Gene ID: k141_1166562_13
Type:
Location: 16656 - 16940 (+)
Type:
Location: 16656 - 16940 (+)
Gene ID: k141_1166562_14
Type: CAZyme
Location: 16993 - 19059 (+)
Type: CAZyme
Location: 16993 - 19059 (+)
Gene ID: k141_1166562_15
Type: CAZyme
Location: 19167 - 20138 (+)
Type: CAZyme
Location: 19167 - 20138 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia sp904501975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.