Cluster: CGMR038390_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR038390
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_424851 | k141_424851_9 | 7454 | 8938 | + | GH18 |
| pfam | k141_424851 | k141_424851_10 | 8946 | 9782 | - | NAD_kinase | NAD_kinase_C |
| pfam | k141_424851 | k141_424851_11 | 9794 | 10702 | - | AA_kinase |
| TC | k141_424851 | k141_424851_12 | 10707 | 11696 | - | 1.A.35.1.1 |
| NULL(UNKNOWN) | k141_424851 | k141_424851_13 | 11853 | 12743 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_424851 | k141_424851_14 | 12750 | 13553 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_424851 | k141_424851_15 | 13627 | 15021 | + | 2.A.4.7.3 |
Gene ID: k141_424851_9
Type: CAZyme
Location: 7454 - 8938 (+)
Type: CAZyme
Location: 7454 - 8938 (+)
Gene ID: k141_424851_10
Type: pfam
Location: 8946 - 9782 (-)
Type: pfam
Location: 8946 - 9782 (-)
Gene ID: k141_424851_11
Type: pfam
Location: 9794 - 10702 (-)
Type: pfam
Location: 9794 - 10702 (-)
Gene ID: k141_424851_12
Type: TC
Location: 10707 - 11696 (-)
Type: TC
Location: 10707 - 11696 (-)
Gene ID: k141_424851_13
Type:
Location: 11853 - 12743 (+)
Type:
Location: 11853 - 12743 (+)
Gene ID: k141_424851_14
Type:
Location: 12750 - 13553 (+)
Type:
Location: 12750 - 13553 (+)
Gene ID: k141_424851_15
Type: TC
Location: 13627 - 15021 (+)
Type: TC
Location: 13627 - 15021 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia sp904501975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.