Cluster: CGMR038390_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR038390
- CGC Family ID: CGCFAM_03244
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_521369 | k141_521369_20 | 21580 | 23655 | - | GH20 |
| NULL(UNKNOWN) | k141_521369 | k141_521369_21 | 23928 | 24764 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_521369 | k141_521369_22 | 24770 | 26758 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_521369 | k141_521369_23 | 26755 | 28539 | - | 3.A.1.135.5 |
| TC | k141_521369 | k141_521369_24 | 28536 | 30407 | - | 3.A.1.106.3 |
Gene ID: k141_521369_20
Type: CAZyme
Location: 21580 - 23655 (-)
Type: CAZyme
Location: 21580 - 23655 (-)
Gene ID: k141_521369_21
Type:
Location: 23928 - 24764 (-)
Type:
Location: 23928 - 24764 (-)
Gene ID: k141_521369_22
Type:
Location: 24770 - 26758 (-)
Type:
Location: 24770 - 26758 (-)
Gene ID: k141_521369_23
Type: TC
Location: 26755 - 28539 (-)
Type: TC
Location: 26755 - 28539 (-)
Gene ID: k141_521369_24
Type: TC
Location: 28536 - 30407 (-)
Type: TC
Location: 28536 - 30407 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia sp904501975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.