Cluster: CGMR038205_CGC28
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR038205
- CGC Family ID: CGCFAM_00099
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_80062 | k141_80062_113 | 105461 | 106849 | + | 4.A.1.2.3 |
| TC | k141_80062 | k141_80062_114 | 106852 | 107343 | + | 4.A.1.2.6 |
| CAZyme | k141_80062 | k141_80062_115 | 107345 | 108781 | + | GH1 |
Gene ID: k141_80062_113
Type: TC
Location: 105461 - 106849 (+)
Type: TC
Location: 105461 - 106849 (+)
Gene ID: k141_80062_114
Type: TC
Location: 106852 - 107343 (+)
Type: TC
Location: 106852 - 107343 (+)
Gene ID: k141_80062_115
Type: CAZyme
Location: 107345 - 108781 (+)
Type: CAZyme
Location: 107345 - 108781 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Amedibacillus
Species
Amedibacillus dolichus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_80062_113 | vegetarian > vegan | 4.43736 | 0.02017 |
| k141_80062_114 | vegetarian > vegan | 4.89784 | 0.02017 |
| k141_80062_115 | vegetarian > vegan | 3.48045 | 0.02017 |