Cluster: CGMR038039_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR038039
- CGC Family ID: CGCFAM_00693
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_84152 | k141_84152_4 | 8049 | 12650 | - | GH141 |
| pfam | k141_84152 | k141_84152_5 | 12748 | 15696 | - | CBM_4_9 |
| STP | k141_84152 | k141_84152_6 | 15748 | 17181 | - | SBP_bac_1 |
| TC | k141_84152 | k141_84152_7 | 17284 | 18174 | - | 3.A.1.1.29 |
| TC | k141_84152 | k141_84152_8 | 18192 | 19154 | - | 3.A.1.1.9 |
| TF | k141_84152 | k141_84152_9 | 19266 | 20567 | + | HTH_AraC | HTH_AraC |
| TC | k141_84152 | k141_84152_10 | 20573 | 22258 | + | 8.A.59.2.1 |
Gene ID: k141_84152_4
Type: CAZyme
Location: 8049 - 12650 (-)
Type: CAZyme
Location: 8049 - 12650 (-)
Gene ID: k141_84152_5
Type: pfam
Location: 12748 - 15696 (-)
Type: pfam
Location: 12748 - 15696 (-)
Gene ID: k141_84152_6
Type: STP
Location: 15748 - 17181 (-)
Type: STP
Location: 15748 - 17181 (-)
Gene ID: k141_84152_7
Type: TC
Location: 17284 - 18174 (-)
Type: TC
Location: 17284 - 18174 (-)
Gene ID: k141_84152_8
Type: TC
Location: 18192 - 19154 (-)
Type: TC
Location: 18192 - 19154 (-)
Gene ID: k141_84152_9
Type: TF
Location: 19266 - 20567 (+)
Type: TF
Location: 19266 - 20567 (+)
Gene ID: k141_84152_10
Type: TC
Location: 20573 - 22258 (+)
Type: TC
Location: 20573 - 22258 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
RGIG1988
Species
RGIG1988 sp934462715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.