Cluster: CGMR038039_CGC35
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR038039
- CGC Family ID: CGCFAM_08564
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_162653 | k141_162653_9 | 10849 | 11706 | + | 3.A.1.24.5 |
| TC | k141_162653 | k141_162653_10 | 11825 | 12823 | + | 3.A.1.24.2 |
| TC | k141_162653 | k141_162653_11 | 12839 | 13543 | + | 3.A.1.24.5 |
| TF | k141_162653 | k141_162653_12 | 13602 | 14474 | - | HTH_AraC |
| pfam | k141_162653 | k141_162653_13 | 14639 | 15211 | + | LacAB_rpiB |
| CAZyme | k141_162653 | k141_162653_14 | 15240 | 18338 | + | GH106 |
Gene ID: k141_162653_9
Type: TC
Location: 10849 - 11706 (+)
Type: TC
Location: 10849 - 11706 (+)
Gene ID: k141_162653_10
Type: TC
Location: 11825 - 12823 (+)
Type: TC
Location: 11825 - 12823 (+)
Gene ID: k141_162653_11
Type: TC
Location: 12839 - 13543 (+)
Type: TC
Location: 12839 - 13543 (+)
Gene ID: k141_162653_12
Type: TF
Location: 13602 - 14474 (-)
Type: TF
Location: 13602 - 14474 (-)
Gene ID: k141_162653_13
Type: pfam
Location: 14639 - 15211 (+)
Type: pfam
Location: 14639 - 15211 (+)
Gene ID: k141_162653_14
Type: CAZyme
Location: 15240 - 18338 (+)
Type: CAZyme
Location: 15240 - 18338 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
RGIG1988
Species
RGIG1988 sp934462715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.