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Cluster: CGMR038039_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_31901 k141_31901_1 390 2732 + 3.A.7.14.1
TC k141_31901 k141_31901_2 2786 3271 + 9.B.34.1.3
peptidase k141_31901 k141_31901_3 3290 5617 + C40.UPW
pfam k141_31901 k141_31901_4 5637 5945 + SLH
CAZyme k141_31901 k141_31901_5 6572 10882 + CE17
TF k141_31901 k141_31901_6 11247 12194 + HTH_AraC
TC k141_31901 k141_31901_7 12367 13305 + 3.A.1.1.14
TC k141_31901 k141_31901_8 13327 14208 + 3.A.1.1.29
pfam k141_31901 k141_31901_9 14322 17216 + Cu_amine_oxidN1 | Beta_helix
NULL(UNKNOWN) k141_31901 k141_31901_10 17277 19517 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_31901 k141_31901_11 19605 22757 + GH141
Gene ID: k141_31901_1
Type: TC
Location: 390 - 2732 (+)
Gene ID: k141_31901_2
Type: TC
Location: 2786 - 3271 (+)
Gene ID: k141_31901_3
Type: peptidase
Location: 3290 - 5617 (+)
Gene ID: k141_31901_4
Type: pfam
Location: 5637 - 5945 (+)
Gene ID: k141_31901_5
Type: CAZyme
Location: 6572 - 10882 (+)
Gene ID: k141_31901_6
Type: TF
Location: 11247 - 12194 (+)
Gene ID: k141_31901_7
Type: TC
Location: 12367 - 13305 (+)
Gene ID: k141_31901_8
Type: TC
Location: 13327 - 14208 (+)
Gene ID: k141_31901_9
Type: pfam
Location: 14322 - 17216 (+)
Gene ID: k141_31901_10
Type:
Location: 17277 - 19517 (+)
Gene ID: k141_31901_11
Type: CAZyme
Location: 19605 - 22757 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UBA1381
→
Family
UBA1381
→
Genus
RGIG1988
→
Species
RGIG1988 sp934462715

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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