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Cluster: CGMR038039_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_168893 k141_168893_4 7547 10168 + GH38
CAZyme k141_168893 k141_168893_5 10317 11543 + GH29
NULL(UNKNOWN) k141_168893 k141_168893_6 11944 12543 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_168893 k141_168893_7 12780 14732 + GH36
CAZyme k141_168893 k141_168893_8 15043 16689 + GH36
CAZyme k141_168893 k141_168893_9 16978 19305 + GH2
TF k141_168893 k141_168893_10 19505 20371 - HTH_AraC
CAZyme k141_168893 k141_168893_11 20635 22281 + GH123
TC k141_168893 k141_168893_12 22287 23234 + 3.A.1.1.10
TC k141_168893 k141_168893_13 23261 24127 + 3.A.1.1.9
TC k141_168893 k141_168893_14 24245 25678 + 3.A.1.1.9
NULL(UNKNOWN) k141_168893 k141_168893_15 25770 28727 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_168893 k141_168893_16 28797 30326 + CE12
CAZyme k141_168893 k141_168893_17 30539 34543 + GH141
pfam k141_168893 k141_168893_18 34617 40004 + SLH | SLH | SLH
pfam k141_168893 k141_168893_19 40022 42790 + SLH
CAZyme k141_168893 k141_168893_20 42810 46379 + GH141
pfam k141_168893 k141_168893_21 46661 48031 + Lipase_GDSL | Lipase_GDSL_2
pfam k141_168893 k141_168893_22 48059 48691 + Lipase_GDSL | Lipase_GDSL_2
CAZyme k141_168893 k141_168893_23 48688 50301 + GH110
pfam k141_168893 k141_168893_24 50336 51337 + Lipase_GDSL_2 | Lipase_GDSL_3 | GxDLY
CAZyme k141_168893 k141_168893_25 51394 53550 + GH3
CAZyme k141_168893 k141_168893_26 53595 55781 + GH95
CAZyme k141_168893 k141_168893_27 55806 57875 + CBM67 | GH78
CAZyme k141_168893 k141_168893_28 57891 59234 + GH10
CAZyme k141_168893 k141_168893_29 59260 61773 + GH94
NULL(UNKNOWN) k141_168893 k141_168893_30 61791 63860 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_168893 k141_168893_31 63841 65169 + GH30_1
Gene ID: k141_168893_4
Type: CAZyme
Location: 7547 - 10168 (+)
Gene ID: k141_168893_5
Type: CAZyme
Location: 10317 - 11543 (+)
Gene ID: k141_168893_6
Type:
Location: 11944 - 12543 (+)
Gene ID: k141_168893_7
Type: CAZyme
Location: 12780 - 14732 (+)
Gene ID: k141_168893_8
Type: CAZyme
Location: 15043 - 16689 (+)
Gene ID: k141_168893_9
Type: CAZyme
Location: 16978 - 19305 (+)
Gene ID: k141_168893_10
Type: TF
Location: 19505 - 20371 (-)
Gene ID: k141_168893_11
Type: CAZyme
Location: 20635 - 22281 (+)
Gene ID: k141_168893_12
Type: TC
Location: 22287 - 23234 (+)
Gene ID: k141_168893_13
Type: TC
Location: 23261 - 24127 (+)
Gene ID: k141_168893_14
Type: TC
Location: 24245 - 25678 (+)
Gene ID: k141_168893_15
Type:
Location: 25770 - 28727 (+)
Gene ID: k141_168893_16
Type: CAZyme
Location: 28797 - 30326 (+)
Gene ID: k141_168893_17
Type: CAZyme
Location: 30539 - 34543 (+)
Gene ID: k141_168893_18
Type: pfam
Location: 34617 - 40004 (+)
Gene ID: k141_168893_19
Type: pfam
Location: 40022 - 42790 (+)
Gene ID: k141_168893_20
Type: CAZyme
Location: 42810 - 46379 (+)
Gene ID: k141_168893_21
Type: pfam
Location: 46661 - 48031 (+)
Gene ID: k141_168893_22
Type: pfam
Location: 48059 - 48691 (+)
Gene ID: k141_168893_23
Type: CAZyme
Location: 48688 - 50301 (+)
Gene ID: k141_168893_24
Type: pfam
Location: 50336 - 51337 (+)
Gene ID: k141_168893_25
Type: CAZyme
Location: 51394 - 53550 (+)
Gene ID: k141_168893_26
Type: CAZyme
Location: 53595 - 55781 (+)
Gene ID: k141_168893_27
Type: CAZyme
Location: 55806 - 57875 (+)
Gene ID: k141_168893_28
Type: CAZyme
Location: 57891 - 59234 (+)
Gene ID: k141_168893_29
Type: CAZyme
Location: 59260 - 61773 (+)
Gene ID: k141_168893_30
Type:
Location: 61791 - 63860 (+)
Gene ID: k141_168893_31
Type: CAZyme
Location: 63841 - 65169 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UBA1381
→
Family
UBA1381
→
Genus
RGIG1988
→
Species
RGIG1988 sp934462715

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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