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Cluster: CGMR038039_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_187676 k141_187676_4 4947 5882 + 3.A.1.1.28
TC k141_187676 k141_187676_5 5875 6768 + 3.A.1.1.47
pfam k141_187676 k141_187676_6 6765 10109 + CBM9_1
pfam k141_187676 k141_187676_7 10234 12810 + Big_5
CAZyme k141_187676 k141_187676_8 12833 15055 + GH39
pfam k141_187676 k141_187676_9 15081 16697 + SLH | SLH | SLH
pfam k141_187676 k141_187676_10 16711 19290 + SLH
CAZyme k141_187676 k141_187676_11 19326 21050 + GH36
CAZyme k141_187676 k141_187676_12 21080 23320 + GH94
Gene ID: k141_187676_4
Type: TC
Location: 4947 - 5882 (+)
Gene ID: k141_187676_5
Type: TC
Location: 5875 - 6768 (+)
Gene ID: k141_187676_6
Type: pfam
Location: 6765 - 10109 (+)
Gene ID: k141_187676_7
Type: pfam
Location: 10234 - 12810 (+)
Gene ID: k141_187676_8
Type: CAZyme
Location: 12833 - 15055 (+)
Gene ID: k141_187676_9
Type: pfam
Location: 15081 - 16697 (+)
Gene ID: k141_187676_10
Type: pfam
Location: 16711 - 19290 (+)
Gene ID: k141_187676_11
Type: CAZyme
Location: 19326 - 21050 (+)
Gene ID: k141_187676_12
Type: CAZyme
Location: 21080 - 23320 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UBA1381
→
Family
UBA1381
→
Genus
RGIG1988
→
Species
RGIG1988 sp934462715

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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