Cluster: CGMR038039_CGC14
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR038039
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_130450 | k141_130450_7 | 9371 | 11209 | - | GH127 |
| CAZyme | k141_130450 | k141_130450_8 | 11335 | 14601 | - | GH141 |
| NULL(UNKNOWN) | k141_130450 | k141_130450_9 | 14623 | 17763 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_130450 | k141_130450_10 | 17783 | 21886 | - | SLH | SLH | SLH | Big_5 |
| CAZyme | k141_130450 | k141_130450_11 | 21956 | 26572 | - | GH141 |
| pfam | k141_130450 | k141_130450_12 | 26690 | 29704 | - | Big_5 |
| pfam | k141_130450 | k141_130450_13 | 29844 | 31286 | - | DUF3502 |
| TC | k141_130450 | k141_130450_14 | 31452 | 32333 | - | 3.A.1.1.29 |
| TC | k141_130450 | k141_130450_15 | 32354 | 33304 | - | 3.A.1.1.9 |
| TF | k141_130450 | k141_130450_16 | 33565 | 34788 | + | HTH_AraC | HTH_AraC |
| TC | k141_130450 | k141_130450_17 | 34863 | 36557 | + | 8.A.59.2.1 |
| CAZyme | k141_130450 | k141_130450_18 | 36663 | 38606 | + | GH36 | GH36 |
| pfam | k141_130450 | k141_130450_19 | 38668 | 41049 | - | MutS_V | Smr | MSSS |
| pfam | k141_130450 | k141_130450_20 | 41121 | 42104 | - | NAD_Gly3P_dh_N | ApbA | NAD_binding_2 | F420_oxidored | NAD_Gly3P_dh_C | GPD_NAD_C_bact |
| TC | k141_130450 | k141_130450_21 | 42411 | 43079 | - | 9.B.31.1.1 |
Gene ID: k141_130450_7
Type: CAZyme
Location: 9371 - 11209 (-)
Type: CAZyme
Location: 9371 - 11209 (-)
Gene ID: k141_130450_8
Type: CAZyme
Location: 11335 - 14601 (-)
Type: CAZyme
Location: 11335 - 14601 (-)
Gene ID: k141_130450_9
Type:
Location: 14623 - 17763 (-)
Type:
Location: 14623 - 17763 (-)
Gene ID: k141_130450_10
Type: pfam
Location: 17783 - 21886 (-)
Type: pfam
Location: 17783 - 21886 (-)
Gene ID: k141_130450_11
Type: CAZyme
Location: 21956 - 26572 (-)
Type: CAZyme
Location: 21956 - 26572 (-)
Gene ID: k141_130450_12
Type: pfam
Location: 26690 - 29704 (-)
Type: pfam
Location: 26690 - 29704 (-)
Gene ID: k141_130450_13
Type: pfam
Location: 29844 - 31286 (-)
Type: pfam
Location: 29844 - 31286 (-)
Gene ID: k141_130450_14
Type: TC
Location: 31452 - 32333 (-)
Type: TC
Location: 31452 - 32333 (-)
Gene ID: k141_130450_15
Type: TC
Location: 32354 - 33304 (-)
Type: TC
Location: 32354 - 33304 (-)
Gene ID: k141_130450_16
Type: TF
Location: 33565 - 34788 (+)
Type: TF
Location: 33565 - 34788 (+)
Gene ID: k141_130450_17
Type: TC
Location: 34863 - 36557 (+)
Type: TC
Location: 34863 - 36557 (+)
Gene ID: k141_130450_18
Type: CAZyme
Location: 36663 - 38606 (+)
Type: CAZyme
Location: 36663 - 38606 (+)
Gene ID: k141_130450_19
Type: pfam
Location: 38668 - 41049 (-)
Type: pfam
Location: 38668 - 41049 (-)
Gene ID: k141_130450_20
Type: pfam
Location: 41121 - 42104 (-)
Type: pfam
Location: 41121 - 42104 (-)
Gene ID: k141_130450_21
Type: TC
Location: 42411 - 43079 (-)
Type: TC
Location: 42411 - 43079 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
RGIG1988
Species
RGIG1988 sp934462715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.