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Cluster: CGMR038039_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_100902 k141_100902_2 544 1683 + GT4
TC k141_100902 k141_100902_3 1752 2261 - 9.B.156.3.1
TC k141_100902 k141_100902_4 2258 2878 - 9.B.156.3.1
CAZyme k141_100902 k141_100902_5 2963 5992 - GT39
TC k141_100902 k141_100902_6 6321 7697 + 2.A.38.1.1
TC k141_100902 k141_100902_7 7741 9177 + 2.A.38.1.1
pfam k141_100902 k141_100902_8 10300 12840 - GTP_EFTU | EFG_C | EFG_IV | NYN_YacP | EF-G_D2
pfam k141_100902 k141_100902_9 12984 14720 - PGM_PMM_I | PGM_PMM_II | PGM_PMM_III
TC k141_100902 k141_100902_10 15231 15782 + 2.A.87.1.3
Gene ID: k141_100902_2
Type: CAZyme
Location: 544 - 1683 (+)
Gene ID: k141_100902_3
Type: TC
Location: 1752 - 2261 (-)
Gene ID: k141_100902_4
Type: TC
Location: 2258 - 2878 (-)
Gene ID: k141_100902_5
Type: CAZyme
Location: 2963 - 5992 (-)
Gene ID: k141_100902_6
Type: TC
Location: 6321 - 7697 (+)
Gene ID: k141_100902_7
Type: TC
Location: 7741 - 9177 (+)
Gene ID: k141_100902_8
Type: pfam
Location: 10300 - 12840 (-)
Gene ID: k141_100902_9
Type: pfam
Location: 12984 - 14720 (-)
Gene ID: k141_100902_10
Type: TC
Location: 15231 - 15782 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UBA1381
→
Family
UBA1381
→
Genus
RGIG1988
→
Species
RGIG1988 sp934462715

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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