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Cluster: CGMR038039_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_86943 k141_86943_7 17951 19519 + GH13_44
TC k141_86943 k141_86943_8 19693 20577 + 3.A.1.1.20
CAZyme k141_86943 k141_86943_9 20577 22895 + CBM67 | GH78
TC k141_86943 k141_86943_10 22903 23736 + 3.A.1.1.34
STP k141_86943 k141_86943_11 23765 25222 + SBP_bac_1
TC k141_86943 k141_86943_12 25355 27052 + 8.A.59.2.1
TF k141_86943 k141_86943_13 27081 28538 + HTH_AraC | HTH_AraC
pfam k141_86943 k141_86943_14 28563 29129 + LacAB_rpiB
CAZyme k141_86943 k141_86943_15 29132 31291 + CBM67 | GH78
CAZyme k141_86943 k141_86943_16 31288 33030 + GH36
Gene ID: k141_86943_7
Type: CAZyme
Location: 17951 - 19519 (+)
Gene ID: k141_86943_8
Type: TC
Location: 19693 - 20577 (+)
Gene ID: k141_86943_9
Type: CAZyme
Location: 20577 - 22895 (+)
Gene ID: k141_86943_10
Type: TC
Location: 22903 - 23736 (+)
Gene ID: k141_86943_11
Type: STP
Location: 23765 - 25222 (+)
Gene ID: k141_86943_12
Type: TC
Location: 25355 - 27052 (+)
Gene ID: k141_86943_13
Type: TF
Location: 27081 - 28538 (+)
Gene ID: k141_86943_14
Type: pfam
Location: 28563 - 29129 (+)
Gene ID: k141_86943_15
Type: CAZyme
Location: 29132 - 31291 (+)
Gene ID: k141_86943_16
Type: CAZyme
Location: 31288 - 33030 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UBA1381
→
Family
UBA1381
→
Genus
RGIG1988
→
Species
RGIG1988 sp934462715

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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