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Cluster: CGMR037507_CGC64

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_274964 k141_274964_54 55167 56468 + 2.A.1.14.2
CAZyme k141_274964 k141_274964_55 56486 58849 + GH31_2
TC k141_274964 k141_274964_56 58930 60525 - 3.A.1.121.4
peptidase k141_274964 k141_274964_57 60748 61668 + C82.UPB
TF k141_274964 k141_274964_58 61710 62426 - GntR
TC k141_274964 k141_274964_59 62442 63764 - 4.A.3.2.9
CAZyme k141_274964 k141_274964_60 63816 65192 - GH1
pfam k141_274964 k141_274964_61 65652 66596 + AstE_AspA_cat
TC k141_274964 k141_274964_62 66711 67751 - 8.A.5.1.6
TC k141_274964 k141_274964_63 67856 69379 - 1.B.17.3.8
TC k141_274964 k141_274964_64 69379 70950 - 2.A.1.3.2
TC k141_274964 k141_274964_65 70947 72041 - 8.A.1.1.2
TC k141_274964 k141_274964_66 72143 73252 - 2.A.45.2.5
Gene ID: k141_274964_54
Type: TC
Location: 55167 - 56468 (+)
Gene ID: k141_274964_55
Type: CAZyme
Location: 56486 - 58849 (+)
Gene ID: k141_274964_56
Type: TC
Location: 58930 - 60525 (-)
Gene ID: k141_274964_57
Type: peptidase
Location: 60748 - 61668 (+)
Gene ID: k141_274964_58
Type: TF
Location: 61710 - 62426 (-)
Gene ID: k141_274964_59
Type: TC
Location: 62442 - 63764 (-)
Gene ID: k141_274964_60
Type: CAZyme
Location: 63816 - 65192 (-)
Gene ID: k141_274964_61
Type: pfam
Location: 65652 - 66596 (+)
Gene ID: k141_274964_62
Type: TC
Location: 66711 - 67751 (-)
Gene ID: k141_274964_63
Type: TC
Location: 67856 - 69379 (-)
Gene ID: k141_274964_64
Type: TC
Location: 69379 - 70950 (-)
Gene ID: k141_274964_65
Type: TC
Location: 70947 - 72041 (-)
Gene ID: k141_274964_66
Type: TC
Location: 72143 - 73252 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_274964_54 vegetarian > omnivore 1.47563 0.02726
k141_274964_55 vegan > omnivore 1.32111 0.00701
k141_274964_59 vegetarian > omnivore 1.19146 0.03173
k141_274964_59 vegetarian > vegan 1.25716 0.04164
k141_274964_60 vegetarian > omnivore 1.03484 0.03173
k141_274964_62 vegetarian > omnivore 1.99806 0.03173
k141_274964_63 vegetarian > omnivore 1.31058 0.03173

🧭 Explore Read Mapping of CGC

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