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Cluster: CGMR037507_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_140172 k141_140172_37 40821 42737 + 4.A.2.1.3
CAZyme k141_140172 k141_140172_38 42761 45391 + GH38
TC k141_140172 k141_140172_39 46072 47640 + 3.D.4.3.2
TC k141_140172 k141_140172_40 47656 48795 + 3.D.4.3.2
TC k141_140172 k141_140172_41 48810 48923 + 9.B.85.1.1
TC k141_140172 k141_140172_42 48923 49213 + 8.A.79.1.1
pfam k141_140172 k141_140172_43 49362 49766 + 4HBT | 4HBT_2
TC k141_140172 k141_140172_44 49763 50455 + 1.A.30.2.2
TC k141_140172 k141_140172_45 50459 50887 + 1.A.30.2.2
TC k141_140172 k141_140172_46 50916 51452 + 2.C.1.2.1
Gene ID: k141_140172_37
Type: TC
Location: 40821 - 42737 (+)
Gene ID: k141_140172_38
Type: CAZyme
Location: 42761 - 45391 (+)
Gene ID: k141_140172_39
Type: TC
Location: 46072 - 47640 (+)
Gene ID: k141_140172_40
Type: TC
Location: 47656 - 48795 (+)
Gene ID: k141_140172_41
Type: TC
Location: 48810 - 48923 (+)
Gene ID: k141_140172_42
Type: TC
Location: 48923 - 49213 (+)
Gene ID: k141_140172_43
Type: pfam
Location: 49362 - 49766 (+)
Gene ID: k141_140172_44
Type: TC
Location: 49763 - 50455 (+)
Gene ID: k141_140172_45
Type: TC
Location: 50459 - 50887 (+)
Gene ID: k141_140172_46
Type: TC
Location: 50916 - 51452 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_140172_37 vegetarian > omnivore 2.56116 0.01389
k141_140172_37 vegetarian > vegan 2.42255 0.01186
k141_140172_38 vegetarian > omnivore 2.01306 0.01389
k141_140172_38 vegetarian > vegan 1.44906 0.03292

🧭 Explore Read Mapping of CGC

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