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Cluster: CGMR037507_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_105455 k141_105455_64 76066 77166 + 1.B.42.1.2
TC k141_105455 k141_105455_65 77166 78248 + 1.B.42.1.2
STP k141_105455 k141_105455_66 78384 80717 + HATPase_c | HisKA | PAS | Response_reg
peptidase k141_105455 k141_105455_67 80947 81603 + C56.975
CAZyme k141_105455 k141_105455_68 81600 82325 + GT51
TC k141_105455 k141_105455_69 82367 82639 - 8.A.8.1.5
pfam k141_105455 k141_105455_70 82636 83490 - RapZ-like_N | PapZ_C
TC k141_105455 k141_105455_71 83536 84027 - 4.A.2.1.4
pfam k141_105455 k141_105455_72 84110 84397 - Ribosomal_S30AE
pfam k141_105455 k141_105455_73 84420 85817 - Sigma54_AID | Sigma54_DBD | Sigma54_CBD
TC k141_105455 k141_105455_74 85901 86626 - 1.B.42.1.2
TC k141_105455 k141_105455_75 86633 87187 - 1.B.42.1.2
TC k141_105455 k141_105455_76 87156 87731 - 1.B.42.1.2
pfam k141_105455 k141_105455_77 87728 88294 - Hydrolase_3
STP k141_105455 k141_105455_78 88309 89295 - CBS | CBS | SIS
TC k141_105455 k141_105455_79 89309 90286 - 2.A.19.5.1
TC k141_105455 k141_105455_80 90514 91326 + 3.A.1.27.3
TC k141_105455 k141_105455_81 91334 92116 + 3.A.1.27.3
TC k141_105455 k141_105455_82 92121 92669 + 3.A.1.27.3
TC k141_105455 k141_105455_83 92688 93323 + 3.A.1.27.3
TC k141_105455 k141_105455_84 93323 93616 + 3.A.1.27.3
Gene ID: k141_105455_64
Type: TC
Location: 76066 - 77166 (+)
Gene ID: k141_105455_65
Type: TC
Location: 77166 - 78248 (+)
Gene ID: k141_105455_66
Type: STP
Location: 78384 - 80717 (+)
Gene ID: k141_105455_67
Type: peptidase
Location: 80947 - 81603 (+)
Gene ID: k141_105455_68
Type: CAZyme
Location: 81600 - 82325 (+)
Gene ID: k141_105455_69
Type: TC
Location: 82367 - 82639 (-)
Gene ID: k141_105455_70
Type: pfam
Location: 82636 - 83490 (-)
Gene ID: k141_105455_71
Type: TC
Location: 83536 - 84027 (-)
Gene ID: k141_105455_72
Type: pfam
Location: 84110 - 84397 (-)
Gene ID: k141_105455_73
Type: pfam
Location: 84420 - 85817 (-)
Gene ID: k141_105455_74
Type: TC
Location: 85901 - 86626 (-)
Gene ID: k141_105455_75
Type: TC
Location: 86633 - 87187 (-)
Gene ID: k141_105455_76
Type: TC
Location: 87156 - 87731 (-)
Gene ID: k141_105455_77
Type: pfam
Location: 87728 - 88294 (-)
Gene ID: k141_105455_78
Type: STP
Location: 88309 - 89295 (-)
Gene ID: k141_105455_79
Type: TC
Location: 89309 - 90286 (-)
Gene ID: k141_105455_80
Type: TC
Location: 90514 - 91326 (+)
Gene ID: k141_105455_81
Type: TC
Location: 91334 - 92116 (+)
Gene ID: k141_105455_82
Type: TC
Location: 92121 - 92669 (+)
Gene ID: k141_105455_83
Type: TC
Location: 92688 - 93323 (+)
Gene ID: k141_105455_84
Type: TC
Location: 93323 - 93616 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_105455_78 vegetarian > vegan 1.18990 0.04164
k141_105455_80 vegetarian > omnivore 1.44890 0.02726
k141_105455_80 vegetarian > vegan 1.25327 0.02999
k141_105455_83 vegetarian > vegan 1.23790 0.04164

🧭 Explore Read Mapping of CGC

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