Cluster: CGMR037507_CGC40
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR037507
- CGC Family ID: CGCFAM_00788
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_197410 | k141_197410_232 | 242267 | 244078 | - | CBM73 | GH19 |
| CAZyme | k141_197410 | k141_197410_233 | 244229 | 244663 | - | GH23 |
| CAZyme | k141_197410 | k141_197410_234 | 244800 | 246995 | - | GH18 |
| NULL(UNKNOWN) | k141_197410 | k141_197410_235 | 246955 | 247131 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_197410 | k141_197410_236 | 247131 | 248609 | - | 3.A.15.1.1 |
| TC | k141_197410 | k141_197410_237 | 248624 | 248950 | - | 1.B.22.1.2 |
| TC | k141_197410 | k141_197410_238 | 248947 | 250545 | - | 1.B.22.1.1 |
Gene ID: k141_197410_232
Type: CAZyme
Location: 242267 - 244078 (-)
Type: CAZyme
Location: 242267 - 244078 (-)
Gene ID: k141_197410_233
Type: CAZyme
Location: 244229 - 244663 (-)
Type: CAZyme
Location: 244229 - 244663 (-)
Gene ID: k141_197410_234
Type: CAZyme
Location: 244800 - 246995 (-)
Type: CAZyme
Location: 244800 - 246995 (-)
Gene ID: k141_197410_235
Type:
Location: 246955 - 247131 (-)
Type:
Location: 246955 - 247131 (-)
Gene ID: k141_197410_236
Type: TC
Location: 247131 - 248609 (-)
Type: TC
Location: 247131 - 248609 (-)
Gene ID: k141_197410_237
Type: TC
Location: 248624 - 248950 (-)
Type: TC
Location: 248624 - 248950 (-)
Gene ID: k141_197410_238
Type: TC
Location: 248947 - 250545 (-)
Type: TC
Location: 248947 - 250545 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter roggenkampii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_197410_232 | vegetarian > omnivore | 1.23942 | 0.03173 |
| k141_197410_234 | vegetarian > omnivore | 2.00573 | 0.03173 |
| k141_197410_235 | vegetarian > omnivore | 2.45021 | 0.03173 |
| k141_197410_235 | vegetarian > vegan | 1.45108 | 0.04164 |
| k141_197410_238 | vegetarian > omnivore | 1.21290 | 0.03173 |