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Cluster: CGMR037507_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_247676 k141_247676_74 80403 81452 - 2.A.86.1.2
TC k141_247676 k141_247676_75 81598 82815 + 2.A.1.46.7
pfam k141_247676 k141_247676_76 82820 83377 - DcrB
TC k141_247676 k141_247676_77 83450 84115 - 2.A.88.8.6
pfam k141_247676 k141_247676_78 84283 84525 + TusA
TC k141_247676 k141_247676_79 84950 85543 - 2.A.95.1.5
pfam k141_247676 k141_247676_80 85721 86824 + Semialdhyde_dh | Semialdhyde_dhC
CAZyme k141_247676 k141_247676_81 87073 89259 + CBM48 | GH13_9
CAZyme k141_247676 k141_247676_82 89256 91229 + CBM48 | GH13_11
pfam k141_247676 k141_247676_83 91247 92542 + NTP_transferase | NTP_transf_3 | Hexapep_GlmU
CAZyme k141_247676 k141_247676_84 92542 93975 + GT5
CAZyme k141_247676 k141_247676_85 93994 96441 + GT35
pfam k141_247676 k141_247676_86 96530 98038 - DAO | DAO_C
STP k141_247676 k141_247676_87 98227 98559 + Rhodanese
TC k141_247676 k141_247676_88 98607 99437 + 9.B.104.1.1
TF k141_247676 k141_247676_89 99454 100212 + HTH_DeoR
TF k141_247676 k141_247676_90 100298 103003 - GerE
CAZyme k141_247676 k141_247676_91 103592 105985 + GT35
CAZyme k141_247676 k141_247676_92 105995 108073 + GH77
TC k141_247676 k141_247676_93 108161 109477 - 2.A.8.1.4
Gene ID: k141_247676_74
Type: TC
Location: 80403 - 81452 (-)
Gene ID: k141_247676_75
Type: TC
Location: 81598 - 82815 (+)
Gene ID: k141_247676_76
Type: pfam
Location: 82820 - 83377 (-)
Gene ID: k141_247676_77
Type: TC
Location: 83450 - 84115 (-)
Gene ID: k141_247676_78
Type: pfam
Location: 84283 - 84525 (+)
Gene ID: k141_247676_79
Type: TC
Location: 84950 - 85543 (-)
Gene ID: k141_247676_80
Type: pfam
Location: 85721 - 86824 (+)
Gene ID: k141_247676_81
Type: CAZyme
Location: 87073 - 89259 (+)
Gene ID: k141_247676_82
Type: CAZyme
Location: 89256 - 91229 (+)
Gene ID: k141_247676_83
Type: pfam
Location: 91247 - 92542 (+)
Gene ID: k141_247676_84
Type: CAZyme
Location: 92542 - 93975 (+)
Gene ID: k141_247676_85
Type: CAZyme
Location: 93994 - 96441 (+)
Gene ID: k141_247676_86
Type: pfam
Location: 96530 - 98038 (-)
Gene ID: k141_247676_87
Type: STP
Location: 98227 - 98559 (+)
Gene ID: k141_247676_88
Type: TC
Location: 98607 - 99437 (+)
Gene ID: k141_247676_89
Type: TF
Location: 99454 - 100212 (+)
Gene ID: k141_247676_90
Type: TF
Location: 100298 - 103003 (-)
Gene ID: k141_247676_91
Type: CAZyme
Location: 103592 - 105985 (+)
Gene ID: k141_247676_92
Type: CAZyme
Location: 105995 - 108073 (+)
Gene ID: k141_247676_93
Type: TC
Location: 108161 - 109477 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_247676_89 vegetarian > omnivore 1.28512 0.03173
k141_247676_91 vegetarian > vegan 1.17238 0.02136

🧭 Explore Read Mapping of CGC

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