Cluster: CGMR037507_CGC32
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR037507
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_257897 | k141_257897_390 | 410060 | 411757 | + | GH13_18 |
| TC | k141_257897 | k141_257897_391 | 411772 | 413064 | + | 3.A.1.1.46 |
| TC | k141_257897 | k141_257897_392 | 413087 | 413968 | + | 3.A.1.1.46 |
| TC | k141_257897 | k141_257897_393 | 413955 | 414797 | + | 3.A.1.1.46 |
| pfam | k141_257897 | k141_257897_394 | 414826 | 415878 | + | ADH_zinc_N |
| pfam | k141_257897 | k141_257897_395 | 415896 | 416684 | + | AP_endonuc_2 |
| CAZyme | k141_257897 | k141_257897_396 | 416699 | 417754 | + | GH179 |
| CAZyme | k141_257897 | k141_257897_397 | 417748 | 420027 | + | GH65 |
| pfam | k141_257897 | k141_257897_398 | 420017 | 420682 | + | Hydrolase | HAD_2 |
| TC | k141_257897 | k141_257897_399 | 420696 | 421778 | + | 3.A.1.1.46 |
| TC | k141_257897 | k141_257897_400 | 421844 | 422758 | + | 1.B.21.1.1 |
Gene ID: k141_257897_390
Type: CAZyme
Location: 410060 - 411757 (+)
Type: CAZyme
Location: 410060 - 411757 (+)
Gene ID: k141_257897_391
Type: TC
Location: 411772 - 413064 (+)
Type: TC
Location: 411772 - 413064 (+)
Gene ID: k141_257897_392
Type: TC
Location: 413087 - 413968 (+)
Type: TC
Location: 413087 - 413968 (+)
Gene ID: k141_257897_393
Type: TC
Location: 413955 - 414797 (+)
Type: TC
Location: 413955 - 414797 (+)
Gene ID: k141_257897_394
Type: pfam
Location: 414826 - 415878 (+)
Type: pfam
Location: 414826 - 415878 (+)
Gene ID: k141_257897_395
Type: pfam
Location: 415896 - 416684 (+)
Type: pfam
Location: 415896 - 416684 (+)
Gene ID: k141_257897_396
Type: CAZyme
Location: 416699 - 417754 (+)
Type: CAZyme
Location: 416699 - 417754 (+)
Gene ID: k141_257897_397
Type: CAZyme
Location: 417748 - 420027 (+)
Type: CAZyme
Location: 417748 - 420027 (+)
Gene ID: k141_257897_398
Type: pfam
Location: 420017 - 420682 (+)
Type: pfam
Location: 420017 - 420682 (+)
Gene ID: k141_257897_399
Type: TC
Location: 420696 - 421778 (+)
Type: TC
Location: 420696 - 421778 (+)
Gene ID: k141_257897_400
Type: TC
Location: 421844 - 422758 (+)
Type: TC
Location: 421844 - 422758 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter roggenkampii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_257897_391 | vegetarian > omnivore | 1.08074 | 0.03173 |
| k141_257897_398 | vegetarian > omnivore | 1.17388 | 0.03173 |
| k141_257897_399 | vegetarian > omnivore | 1.24282 | 0.03173 |
| k141_257897_400 | vegetarian > omnivore | 2.77589 | 0.01389 |