Cluster: CGMR037507_CGC31
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR037507
- CGC Family ID: CGCFAM_00261
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_257897 | k141_257897_235 | 233255 | 234988 | - | 2.A.36.6.11 |
| peptidase | k141_257897 | k141_257897_236 | 235086 | 236000 | - | S66.002 |
| CAZyme | k141_257897 | k141_257897_237 | 236108 | 236719 | + | GH23 |
| pfam | k141_257897 | k141_257897_238 | 236759 | 237490 | - | PilZ | PilZN |
| TC | k141_257897 | k141_257897_239 | 237699 | 237953 | + | 1.E.43.1.1 |
| TC | k141_257897 | k141_257897_240 | 238066 | 240168 | + | 1.B.14.1.2 |
| CAZyme | k141_257897 | k141_257897_241 | 240233 | 241918 | - | GH37 |
| TF | k141_257897 | k141_257897_242 | 242021 | 242977 | - | HTH_AraC | HTH_AraC |
| TC | k141_257897 | k141_257897_243 | 243093 | 244280 | + | 2.A.1.2.26 |
Gene ID: k141_257897_235
Type: TC
Location: 233255 - 234988 (-)
Type: TC
Location: 233255 - 234988 (-)
Gene ID: k141_257897_236
Type: peptidase
Location: 235086 - 236000 (-)
Type: peptidase
Location: 235086 - 236000 (-)
Gene ID: k141_257897_237
Type: CAZyme
Location: 236108 - 236719 (+)
Type: CAZyme
Location: 236108 - 236719 (+)
Gene ID: k141_257897_238
Type: pfam
Location: 236759 - 237490 (-)
Type: pfam
Location: 236759 - 237490 (-)
Gene ID: k141_257897_239
Type: TC
Location: 237699 - 237953 (+)
Type: TC
Location: 237699 - 237953 (+)
Gene ID: k141_257897_240
Type: TC
Location: 238066 - 240168 (+)
Type: TC
Location: 238066 - 240168 (+)
Gene ID: k141_257897_241
Type: CAZyme
Location: 240233 - 241918 (-)
Type: CAZyme
Location: 240233 - 241918 (-)
Gene ID: k141_257897_242
Type: TF
Location: 242021 - 242977 (-)
Type: TF
Location: 242021 - 242977 (-)
Gene ID: k141_257897_243
Type: TC
Location: 243093 - 244280 (+)
Type: TC
Location: 243093 - 244280 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter roggenkampii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_257897_236 | vegetarian > vegan | 2.27870 | 0.04164 |
| k141_257897_237 | vegetarian > vegan | 1.62417 | 0.02494 |
| k141_257897_238 | vegetarian > omnivore | 4.64258 | 0.01389 |
| k141_257897_238 | vegetarian > vegan | 1.93941 | 0.02999 |
| k141_257897_240 | vegetarian > omnivore | 1.25497 | 0.03173 |
| k141_257897_240 | vegetarian > vegan | 1.95940 | 0.02981 |