Cluster: CGMR037507_CGC27
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR037507
- CGC Family ID: CGCFAM_00796
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_128156 | k141_128156_27 | 27463 | 28782 | + | 2.A.1.4.4 |
| TC | k141_128156 | k141_128156_28 | 28915 | 30306 | + | 2.A.1.4.1 |
| pfam | k141_128156 | k141_128156_29 | 30482 | 30934 | + | DUF1198 |
| TC | k141_128156 | k141_128156_30 | 31037 | 32227 | + | 2.A.1.2.26 |
| TC | k141_128156 | k141_128156_31 | 32276 | 33181 | - | 2.A.7.3.12 |
| pfam | k141_128156 | k141_128156_32 | 33315 | 34694 | - | LamB |
| TC | k141_128156 | k141_128156_33 | 34833 | 35138 | - | 4.A.3.2.1 |
| CAZyme | k141_128156 | k141_128156_34 | 35141 | 36517 | - | GH1 |
| TC | k141_128156 | k141_128156_35 | 36535 | 37863 | - | 4.A.3.2.6 |
| TC | k141_128156 | k141_128156_36 | 37875 | 38189 | - | 4.A.3.2.6 |
Gene ID: k141_128156_27
Type: TC
Location: 27463 - 28782 (+)
Type: TC
Location: 27463 - 28782 (+)
Gene ID: k141_128156_28
Type: TC
Location: 28915 - 30306 (+)
Type: TC
Location: 28915 - 30306 (+)
Gene ID: k141_128156_29
Type: pfam
Location: 30482 - 30934 (+)
Type: pfam
Location: 30482 - 30934 (+)
Gene ID: k141_128156_30
Type: TC
Location: 31037 - 32227 (+)
Type: TC
Location: 31037 - 32227 (+)
Gene ID: k141_128156_31
Type: TC
Location: 32276 - 33181 (-)
Type: TC
Location: 32276 - 33181 (-)
Gene ID: k141_128156_32
Type: pfam
Location: 33315 - 34694 (-)
Type: pfam
Location: 33315 - 34694 (-)
Gene ID: k141_128156_33
Type: TC
Location: 34833 - 35138 (-)
Type: TC
Location: 34833 - 35138 (-)
Gene ID: k141_128156_34
Type: CAZyme
Location: 35141 - 36517 (-)
Type: CAZyme
Location: 35141 - 36517 (-)
Gene ID: k141_128156_35
Type: TC
Location: 36535 - 37863 (-)
Type: TC
Location: 36535 - 37863 (-)
Gene ID: k141_128156_36
Type: TC
Location: 37875 - 38189 (-)
Type: TC
Location: 37875 - 38189 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter roggenkampii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_128156_29 | vegetarian > omnivore | 1.62786 | 0.03173 |
| k141_128156_29 | vegetarian > vegan | 1.60000 | 0.04164 |
| k141_128156_31 | vegetarian > omnivore | 1.12817 | 0.03173 |
| k141_128156_32 | vegetarian > omnivore | 1.26747 | 0.03173 |
| k141_128156_32 | vegetarian > vegan | 1.58393 | 0.02999 |
| k141_128156_33 | vegetarian > omnivore | 2.29725 | 0.01389 |
| k141_128156_34 | vegetarian > omnivore | 1.08669 | 0.03173 |
| k141_128156_34 | vegetarian > vegan | 1.17310 | 0.02494 |
| k141_128156_35 | vegetarian > omnivore | 1.56899 | 0.03173 |
| k141_128156_35 | vegetarian > vegan | 1.12592 | 0.04164 |
| k141_128156_36 | vegetarian > omnivore | 1.85869 | 0.02726 |
| k141_128156_36 | vegetarian > vegan | 1.15219 | 0.04164 |