Cluster: CGMR037507_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR037507
- CGC Family ID: CGCFAM_03344
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_304443 | k141_304443_117 | 134728 | 136581 | + | 4.A.1.2.2 |
| CAZyme | k141_304443 | k141_304443_118 | 136594 | 137988 | + | GH1 |
| TC | k141_304443 | k141_304443_119 | 138190 | 139608 | + | 1.B.17.3.10 |
| sulfatase | k141_304443 | k141_304443_120 | 139659 | 140423 | + | S1_4 |
| TC | k141_304443 | k141_304443_121 | 140506 | 141078 | - | 9.B.27.2.7 |
| TC | k141_304443 | k141_304443_122 | 141236 | 141823 | + | 9.B.29.3.1 |
Gene ID: k141_304443_117
Type: TC
Location: 134728 - 136581 (+)
Type: TC
Location: 134728 - 136581 (+)
Gene ID: k141_304443_118
Type: CAZyme
Location: 136594 - 137988 (+)
Type: CAZyme
Location: 136594 - 137988 (+)
Gene ID: k141_304443_119
Type: TC
Location: 138190 - 139608 (+)
Type: TC
Location: 138190 - 139608 (+)
Gene ID: k141_304443_120
Type: sulfatase
Location: 139659 - 140423 (+)
Type: sulfatase
Location: 139659 - 140423 (+)
Gene ID: k141_304443_121
Type: TC
Location: 140506 - 141078 (-)
Type: TC
Location: 140506 - 141078 (-)
Gene ID: k141_304443_122
Type: TC
Location: 141236 - 141823 (+)
Type: TC
Location: 141236 - 141823 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter roggenkampii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_304443_121 | vegan > omnivore | 1.98259 | 0.04716 |
| k141_304443_121 | vegetarian > omnivore | 2.06263 | 0.03173 |