Cluster: CGMR037507_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR037507
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_123356 | k141_123356_20 | 19058 | 20575 | + | 1.B.3.1.2 |
| TC | k141_123356 | k141_123356_21 | 20642 | 22012 | + | 4.A.1.2.1 |
| CAZyme | k141_123356 | k141_123356_22 | 22012 | 23418 | + | GH32 |
| TF | k141_123356 | k141_123356_23 | 23447 | 24463 | + | LacI |
| TC | k141_123356 | k141_123356_24 | 24553 | 26103 | + | 1.B.52.2.2 |
Gene ID: k141_123356_20
Type: TC
Location: 19058 - 20575 (+)
Type: TC
Location: 19058 - 20575 (+)
Gene ID: k141_123356_21
Type: TC
Location: 20642 - 22012 (+)
Type: TC
Location: 20642 - 22012 (+)
Gene ID: k141_123356_22
Type: CAZyme
Location: 22012 - 23418 (+)
Type: CAZyme
Location: 22012 - 23418 (+)
Gene ID: k141_123356_23
Type: TF
Location: 23447 - 24463 (+)
Type: TF
Location: 23447 - 24463 (+)
Gene ID: k141_123356_24
Type: TC
Location: 24553 - 26103 (+)
Type: TC
Location: 24553 - 26103 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter roggenkampii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_123356_20 | vegetarian > vegan | 1.10258 | 0.04164 |
| k141_123356_24 | vegetarian > omnivore | 1.03033 | 0.03173 |