Cluster: CGMR037507_CGC10
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR037507
- CGC Family ID: CGCFAM_03801
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_167067 | k141_167067_8 | 5887 | 6666 | - | 3.A.1.14.16 |
| TC | k141_167067 | k141_167067_9 | 6659 | 7651 | - | 3.A.1.14.5 |
| TC | k141_167067 | k141_167067_10 | 7651 | 8472 | - | 3.A.1.14.16 |
| pfam | k141_167067 | k141_167067_11 | 8469 | 9497 | - | HemS | HemS | ChuX_HutX | ChuX_HutX |
| TC | k141_167067 | k141_167067_12 | 9533 | 11515 | - | 1.B.14.2.14 |
| pfam | k141_167067 | k141_167067_13 | 11969 | 13015 | - | DAHP_synth_1 |
| pfam | k141_167067 | k141_167067_14 | 13168 | 14001 | - | Kinase-PPPase |
| TC | k141_167067 | k141_167067_15 | 14337 | 16715 | + | 8.A.7.1.4 |
| TC | k141_167067 | k141_167067_16 | 16950 | 18350 | + | 2.A.2.3.5 |
| CAZyme | k141_167067 | k141_167067_17 | 18354 | 20729 | + | GH3 |
| TC | k141_167067 | k141_167067_18 | 21050 | 22234 | - | 2.A.86.2.1 |
Gene ID: k141_167067_8
Type: TC
Location: 5887 - 6666 (-)
Type: TC
Location: 5887 - 6666 (-)
Gene ID: k141_167067_9
Type: TC
Location: 6659 - 7651 (-)
Type: TC
Location: 6659 - 7651 (-)
Gene ID: k141_167067_10
Type: TC
Location: 7651 - 8472 (-)
Type: TC
Location: 7651 - 8472 (-)
Gene ID: k141_167067_11
Type: pfam
Location: 8469 - 9497 (-)
Type: pfam
Location: 8469 - 9497 (-)
Gene ID: k141_167067_12
Type: TC
Location: 9533 - 11515 (-)
Type: TC
Location: 9533 - 11515 (-)
Gene ID: k141_167067_13
Type: pfam
Location: 11969 - 13015 (-)
Type: pfam
Location: 11969 - 13015 (-)
Gene ID: k141_167067_14
Type: pfam
Location: 13168 - 14001 (-)
Type: pfam
Location: 13168 - 14001 (-)
Gene ID: k141_167067_15
Type: TC
Location: 14337 - 16715 (+)
Type: TC
Location: 14337 - 16715 (+)
Gene ID: k141_167067_16
Type: TC
Location: 16950 - 18350 (+)
Type: TC
Location: 16950 - 18350 (+)
Gene ID: k141_167067_17
Type: CAZyme
Location: 18354 - 20729 (+)
Type: CAZyme
Location: 18354 - 20729 (+)
Gene ID: k141_167067_18
Type: TC
Location: 21050 - 22234 (-)
Type: TC
Location: 21050 - 22234 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter roggenkampii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_167067_9 | vegetarian > omnivore | 1.25192 | 0.03173 |
| k141_167067_9 | vegetarian > vegan | 1.24319 | 0.04164 |
| k141_167067_11 | vegetarian > vegan | 1.29845 | 0.04164 |
| k141_167067_13 | vegetarian > omnivore | 1.32692 | 0.03173 |
| k141_167067_13 | vegetarian > vegan | 1.07751 | 0.04164 |
| k141_167067_16 | vegetarian > vegan | 1.17939 | 0.04164 |
| k141_167067_17 | vegetarian > omnivore | 1.33967 | 0.03173 |
| k141_167067_17 | vegetarian > vegan | 1.70942 | 0.04164 |